Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.32□□□□□ -1.88
AP3D1O14617 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
AP3D1O14617 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
AP3D1O14617 RNA5SP42-201ENST00000364278 115 ntBASIC3.32□□□□□ -1.88
AP3D1O14617 AC069157.1-201ENST00000421749 137 ntBASIC3.32□□□□□ -1.88
AP3D1O14617 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
AP3D1O14617 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.32□□□□□ -1.88
AP3D1O14617 AC119618.1-201ENST00000434191 222 ntBASIC3.32□□□□□ -1.88
AP3D1O14617 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.32□□□□□ -1.88
AP3D1O14617 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.32□□□□□ -1.88
AP3D1O14617 RPS24P13-201ENST00000442520 397 ntBASIC3.32□□□□□ -1.88
AP3D1O14617 AL022238.1-201ENST00000442557 355 ntBASIC3.32□□□□□ -1.88
AP3D1O14617 NEFMP1-201ENST00000443423 1006 ntBASIC3.32□□□□□ -1.88
AP3D1O14617 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.32□□□□□ -1.88
AP3D1O14617 AL033528.1-201ENST00000453780 140 ntBASIC3.32□□□□□ -1.88
AP3D1O14617 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.32□□□□□ -1.88
AP3D1O14617 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
AP3D1O14617 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.32□□□□□ -1.88
AP3D1O14617 RN7SL442P-201ENST00000473804 320 ntBASIC3.32□□□□□ -1.88
AP3D1O14617 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.32□□□□□ -1.88
AP3D1O14617 FCF1P3-201ENST00000496394 590 ntBASIC3.32□□□□□ -1.88
AP3D1O14617 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.32□□□□□ -1.88
AP3D1O14617 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.32□□□□□ -1.88
AP3D1O14617 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.32□□□□□ -1.88
AP3D1O14617 AC005771.1-201ENST00000585581 349 ntBASIC3.32□□□□□ -1.88
AP3D1O14617 AL136363.1-201ENST00000605349 337 ntBASIC3.32□□□□□ -1.88
AP3D1O14617 AC131902.3-201ENST00000611767 581 ntBASIC3.32□□□□□ -1.88
AP3D1O14617 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.32□□□□□ -1.88
AP3D1O14617 AL161629.2-201ENST00000615347 275 ntBASIC3.32□□□□□ -1.88
AP3D1O14617 MTND5P29-201ENST00000458676 1807 ntBASIC3.32□□□□□ -1.88
AP3D1O14617 AL359693.1-201ENST00000614959 2407 ntBASIC3.32□□□□□ -1.88
AP3D1O14617 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
AP3D1O14617 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
AP3D1O14617 ELL2P3-201ENST00000457883 1602 ntBASIC3.31□□□□□ -1.88
AP3D1O14617 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
AP3D1O14617 UBE2L2-201ENST00000254302 429 ntBASIC3.31□□□□□ -1.88
AP3D1O14617 U8.3-201ENST00000363321 132 ntBASIC3.31□□□□□ -1.88
AP3D1O14617 RNU6-960P-201ENST00000364056 120 ntBASIC3.31□□□□□ -1.88
AP3D1O14617 SMIM11P1-201ENST00000369586 178 ntBASIC3.31□□□□□ -1.88
AP3D1O14617 SNORA40.3-201ENST00000390964 122 ntBASIC3.31□□□□□ -1.88
AP3D1O14617 RNU6-817P-201ENST00000391083 104 ntBASIC3.31□□□□□ -1.88
AP3D1O14617 U3.39-201ENST00000408569 239 ntBASIC3.31□□□□□ -1.88
AP3D1O14617 RNU2-8P-201ENST00000410727 190 ntBASIC3.31□□□□□ -1.88
AP3D1O14617 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.31□□□□□ -1.88
AP3D1O14617 ISCA1P1-201ENST00000426679 387 ntBASIC3.31□□□□□ -1.88
AP3D1O14617 AL365496.1-201ENST00000426885 215 ntBASIC3.31□□□□□ -1.88
AP3D1O14617 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.31□□□□□ -1.88
AP3D1O14617 HMGB1P27-201ENST00000431429 603 ntBASIC3.31□□□□□ -1.88
AP3D1O14617 BX679664.1-201ENST00000434429 253 ntBASIC3.31□□□□□ -1.88
AP3D1O14617 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.31□□□□□ -1.88
AP3D1O14617 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
AP3D1O14617 RPL12P25-201ENST00000455592 494 ntBASIC3.31□□□□□ -1.88
AP3D1O14617 AC092798.1-201ENST00000458542 409 ntBASIC3.31□□□□□ -1.88
AP3D1O14617 snoU109.1-201ENST00000459339 135 ntBASIC3.31□□□□□ -1.88
AP3D1O14617 RNU7-23P-201ENST00000459465 62 ntBASIC3.31□□□□□ -1.88
AP3D1O14617 AC010401.1-201ENST00000463867 348 ntBASIC3.31□□□□□ -1.88
AP3D1O14617 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.31□□□□□ -1.88
AP3D1O14617 RANP9-201ENST00000519957 271 ntBASIC3.31□□□□□ -1.88
AP3D1O14617 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.31□□□□□ -1.88
AP3D1O14617 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.31□□□□□ -1.88
AP3D1O14617 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
AP3D1O14617 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.31□□□□□ -1.88
AP3D1O14617 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.31□□□□□ -1.88
AP3D1O14617 AL391261.3-201ENST00000557194 520 ntBASIC3.31□□□□□ -1.88
AP3D1O14617 TGIF1P1-201ENST00000558095 802 ntBASIC3.31□□□□□ -1.88
AP3D1O14617 AC037471.2-201ENST00000564941 598 ntBASIC3.31□□□□□ -1.88
AP3D1O14617 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
AP3D1O14617 AC007363.1-201ENST00000604736 620 ntBASIC3.31□□□□□ -1.88
AP3D1O14617 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.31□□□□□ -1.88
AP3D1O14617 AC107294.1-201ENST00000609524 467 ntBASIC3.31□□□□□ -1.88
AP3D1O14617 AC008250.2-201ENST00000615261 205 ntBASIC3.31□□□□□ -1.88
AP3D1O14617 AL158063.1-201ENST00000615349 536 ntBASIC3.31□□□□□ -1.88
AP3D1O14617 Z69908.1-201ENST00000622603 247 ntBASIC3.31□□□□□ -1.88
AP3D1O14617 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.31□□□□□ -1.88
AP3D1O14617 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.31□□□□□ -1.88
AP3D1O14617 AC093908.1-201ENST00000623125 8092 ntBASIC3.31□□□□□ -1.88
AP3D1O14617 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
AP3D1O14617 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
AP3D1O14617 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
AP3D1O14617 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
AP3D1O14617 AL513302.2-201ENST00000562313 1842 ntBASIC3.3□□□□□ -1.88
AP3D1O14617 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
AP3D1O14617 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
AP3D1O14617 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
AP3D1O14617 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.3□□□□□ -1.88
AP3D1O14617 FAM35CP-201ENST00000554755 2470 ntBASIC3.3□□□□□ -1.88
AP3D1O14617 AC004972.1-201ENST00000623934 2209 ntBASIC3.3□□□□□ -1.88
AP3D1O14617 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
AP3D1O14617 MIR30E-201ENST00000362104 92 ntBASIC3.3□□□□□ -1.88
AP3D1O14617 RNA5SP51-201ENST00000364750 119 ntBASIC3.3□□□□□ -1.88
AP3D1O14617 RNU6-297P-201ENST00000384636 107 ntBASIC3.3□□□□□ -1.88
AP3D1O14617 MIR888-201ENST00000401186 77 ntBASIC3.3□□□□□ -1.88
AP3D1O14617 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.3□□□□□ -1.88
AP3D1O14617 AC007283.2-201ENST00000424739 197 ntBASIC3.3□□□□□ -1.88
AP3D1O14617 AC104651.1-201ENST00000427559 735 ntBASIC3.3□□□□□ -1.88
AP3D1O14617 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.3□□□□□ -1.88
AP3D1O14617 SNRPEP9-201ENST00000436794 238 ntBASIC3.3□□□□□ -1.88
AP3D1O14617 ST13P20-201ENST00000447996 1065 ntBASIC3.3□□□□□ -1.88
AP3D1O14617 AC009961.3-201ENST00000449832 765 ntBASIC3.3□□□□□ -1.88
AP3D1O14617 AC093392.2-201ENST00000450682 337 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms