Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.15□□□□□ -1.91
CLDN4O14493 FAM35CP-201ENST00000554755 2470 ntBASIC3.15□□□□□ -1.91
CLDN4O14493 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLDN4O14493 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.91
CLDN4O14493 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
CLDN4O14493 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.15□□□□□ -1.91
CLDN4O14493 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLDN4O14493 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLDN4O14493 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLDN4O14493 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
CLDN4O14493 AL356274.2-201ENST00000624379 3752 ntBASIC3.14□□□□□ -1.91
CLDN4O14493 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CLDN4O14493 MTND4P4-201ENST00000439033 1366 ntBASIC3.14□□□□□ -1.91
CLDN4O14493 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.14□□□□□ -1.91
CLDN4O14493 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLDN4O14493 RNU4-21P-201ENST00000362802 126 ntBASIC3.14□□□□□ -1.91
CLDN4O14493 RNA5SP197-201ENST00000363357 119 ntBASIC3.14□□□□□ -1.91
CLDN4O14493 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLDN4O14493 SNORD115.1-201ENST00000391109 76 ntBASIC3.14□□□□□ -1.91
CLDN4O14493 Y_RNA.608-201ENST00000410647 95 ntBASIC3.14□□□□□ -1.91
CLDN4O14493 RNA5SP38-201ENST00000410750 119 ntBASIC3.14□□□□□ -1.91
CLDN4O14493 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.14□□□□□ -1.91
CLDN4O14493 CYCSP46-201ENST00000423569 204 ntBASIC3.14□□□□□ -1.91
CLDN4O14493 USP12PX-201ENST00000432383 1057 ntBASIC3.14□□□□□ -1.91
CLDN4O14493 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.14□□□□□ -1.91
CLDN4O14493 AL353705.1-201ENST00000433468 480 ntBASIC3.14□□□□□ -1.91
CLDN4O14493 HIGD1AP11-201ENST00000438361 280 ntBASIC3.14□□□□□ -1.91
CLDN4O14493 RPL21P8-201ENST00000465083 535 ntBASIC3.14□□□□□ -1.91
CLDN4O14493 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN4O14493 AC110794.1-201ENST00000505816 425 ntBASIC3.14□□□□□ -1.91
CLDN4O14493 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.14□□□□□ -1.91
CLDN4O14493 PCBP2P3-201ENST00000509726 843 ntBASIC3.14□□□□□ -1.91
CLDN4O14493 AC114797.1-201ENST00000514003 728 ntBASIC3.14□□□□□ -1.91
CLDN4O14493 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.14□□□□□ -1.91
CLDN4O14493 AC060788.1-201ENST00000521318 469 ntBASIC3.14□□□□□ -1.91
CLDN4O14493 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.14□□□□□ -1.91
CLDN4O14493 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN4O14493 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN4O14493 AC007115.1-201ENST00000546853 234 ntBASIC3.14□□□□□ -1.91
CLDN4O14493 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.14□□□□□ -1.91
CLDN4O14493 AC106782.4-201ENST00000568264 210 ntBASIC3.14□□□□□ -1.91
CLDN4O14493 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.14□□□□□ -1.91
CLDN4O14493 KC877982.1-201ENST00000602313 470 ntBASIC3.14□□□□□ -1.91
CLDN4O14493 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN4O14493 U73023.1-201ENST00000603134 700 ntBASIC3.14□□□□□ -1.91
CLDN4O14493 AC112191.3-201ENST00000604371 277 ntBASIC3.14□□□□□ -1.91
CLDN4O14493 AL359999.1-201ENST00000604513 294 ntBASIC3.14□□□□□ -1.91
CLDN4O14493 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN4O14493 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLDN4O14493 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLDN4O14493 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CLDN4O14493 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.13□□□□□ -1.91
CLDN4O14493 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CLDN4O14493 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.13□□□□□ -1.91
CLDN4O14493 RNY4P16-201ENST00000364768 94 ntBASIC3.13□□□□□ -1.91
CLDN4O14493 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN4O14493 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CLDN4O14493 MIR325-201ENST00000385260 98 ntBASIC3.13□□□□□ -1.91
CLDN4O14493 SNORA48.2-201ENST00000390926 124 ntBASIC3.13□□□□□ -1.91
CLDN4O14493 FCF1P10-201ENST00000407590 479 ntBASIC3.13□□□□□ -1.91
CLDN4O14493 RNU6-1077P-201ENST00000410506 102 ntBASIC3.13□□□□□ -1.91
CLDN4O14493 RNU6-55P-201ENST00000411092 107 ntBASIC3.13□□□□□ -1.91
CLDN4O14493 RNU6-954P-201ENST00000411355 107 ntBASIC3.13□□□□□ -1.91
CLDN4O14493 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN4O14493 ELOCP17-201ENST00000414751 326 ntBASIC3.13□□□□□ -1.91
CLDN4O14493 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.13□□□□□ -1.91
CLDN4O14493 AL451054.2-201ENST00000420896 202 ntBASIC3.13□□□□□ -1.91
CLDN4O14493 AC090960.1-201ENST00000421072 306 ntBASIC3.13□□□□□ -1.91
CLDN4O14493 AC005300.1-201ENST00000428401 373 ntBASIC3.13□□□□□ -1.91
CLDN4O14493 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN4O14493 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN4O14493 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.13□□□□□ -1.91
CLDN4O14493 RPS27P29-201ENST00000463110 252 ntBASIC3.13□□□□□ -1.91
CLDN4O14493 AC116337.2-201ENST00000477662 156 ntBASIC3.13□□□□□ -1.91
CLDN4O14493 AC006445.2-201ENST00000510061 472 ntBASIC3.13□□□□□ -1.91
CLDN4O14493 OR5BM1P-201ENST00000512021 366 ntBASIC3.13□□□□□ -1.91
CLDN4O14493 FABP5P5-201ENST00000515537 406 ntBASIC3.13□□□□□ -1.91
CLDN4O14493 RNU6-711P-201ENST00000517255 106 ntBASIC3.13□□□□□ -1.91
CLDN4O14493 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN4O14493 AC107934.1-201ENST00000522215 217 ntBASIC3.13□□□□□ -1.91
CLDN4O14493 MIR4293-201ENST00000584305 78 ntBASIC3.13□□□□□ -1.91
CLDN4O14493 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN4O14493 AC002545.1-201ENST00000592511 181 ntBASIC3.13□□□□□ -1.91
CLDN4O14493 AL162713.1-201ENST00000604480 262 ntBASIC3.13□□□□□ -1.91
CLDN4O14493 HSPE1P7-201ENST00000604681 321 ntBASIC3.13□□□□□ -1.91
CLDN4O14493 uc_338.1-201ENST00000612113 180 ntBASIC3.13□□□□□ -1.91
CLDN4O14493 AL157817.1-201ENST00000614264 790 ntBASIC3.13□□□□□ -1.91
CLDN4O14493 SNHG22-203ENST00000617833 660 ntBASIC3.13□□□□□ -1.91
CLDN4O14493 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.13□□□□□ -1.91
CLDN4O14493 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN4O14493 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN4O14493 RNY3P13-201ENST00000365542 102 ntBASIC3.12□□□□□ -1.91
CLDN4O14493 RNA5SP120-201ENST00000410900 112 ntBASIC3.12□□□□□ -1.91
CLDN4O14493 OR2B8P-201ENST00000432841 938 ntBASIC3.12□□□□□ -1.91
CLDN4O14493 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.12□□□□□ -1.91
CLDN4O14493 CBWD4P-201ENST00000445695 655 ntBASIC3.12□□□□□ -1.91
CLDN4O14493 GAPDHP27-201ENST00000447427 1020 ntBASIC3.12□□□□□ -1.91
CLDN4O14493 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.12□□□□□ -1.91
CLDN4O14493 RPS4XP2-201ENST00000458402 793 ntBASIC3.12□□□□□ -1.91
CLDN4O14493 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms