Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 RNU2-62P-201ENST00000410868 191 ntBASIC3.99□□□□□ -1.77
TRIM38O00635 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM38O00635 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.99□□□□□ -1.77
TRIM38O00635 MTCO1P20-201ENST00000425366 358 ntBASIC3.99□□□□□ -1.77
TRIM38O00635 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.99□□□□□ -1.77
TRIM38O00635 AC005534.2-201ENST00000431047 433 ntBASIC3.99□□□□□ -1.77
TRIM38O00635 TBCAP1-201ENST00000436520 327 ntBASIC3.99□□□□□ -1.77
TRIM38O00635 AL451074.3-201ENST00000437709 472 ntBASIC3.99□□□□□ -1.77
TRIM38O00635 AC093156.1-201ENST00000440382 670 ntBASIC3.99□□□□□ -1.77
TRIM38O00635 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM38O00635 RABEPKP1-201ENST00000440529 1026 ntBASIC3.99□□□□□ -1.77
TRIM38O00635 MTCYBP6-201ENST00000441810 138 ntBASIC3.99□□□□□ -1.77
TRIM38O00635 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.99□□□□□ -1.77
TRIM38O00635 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.99□□□□□ -1.77
TRIM38O00635 RPL7L1P8-201ENST00000469911 741 ntBASIC3.99□□□□□ -1.77
TRIM38O00635 AC092451.1-201ENST00000480211 153 ntBASIC3.99□□□□□ -1.77
TRIM38O00635 AC108860.1-201ENST00000484521 383 ntBASIC3.99□□□□□ -1.77
TRIM38O00635 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM38O00635 FTH1P9-201ENST00000513251 355 ntBASIC3.99□□□□□ -1.77
TRIM38O00635 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.99□□□□□ -1.77
TRIM38O00635 SNORA31.8-201ENST00000516327 108 ntBASIC3.99□□□□□ -1.77
TRIM38O00635 Y_RNA.704-201ENST00000516851 102 ntBASIC3.99□□□□□ -1.77
TRIM38O00635 NARSP2-201ENST00000518524 679 ntBASIC3.99□□□□□ -1.77
TRIM38O00635 AC100870.1-201ENST00000522035 505 ntBASIC3.99□□□□□ -1.77
TRIM38O00635 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.99□□□□□ -1.77
TRIM38O00635 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.99□□□□□ -1.77
TRIM38O00635 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.99□□□□□ -1.77
TRIM38O00635 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.99□□□□□ -1.77
TRIM38O00635 AC006116.10-201ENST00000591836 581 ntBASIC3.99□□□□□ -1.77
TRIM38O00635 AC245517.5-201ENST00000611529 162 ntBASIC3.99□□□□□ -1.77
TRIM38O00635 AL365204.3-201ENST00000612448 685 ntBASIC3.99□□□□□ -1.77
TRIM38O00635 AL121772.2-201ENST00000614331 297 ntBASIC3.99□□□□□ -1.77
TRIM38O00635 AC091953.2-201ENST00000623979 160 ntBASIC3.99□□□□□ -1.77
TRIM38O00635 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.99□□□□□ -1.77
TRIM38O00635 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
TRIM38O00635 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM38O00635 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM38O00635 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM38O00635 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM38O00635 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM38O00635 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.98□□□□□ -1.77
TRIM38O00635 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM38O00635 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
TRIM38O00635 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM38O00635 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM38O00635 DEFB108F-201ENST00000344638 222 ntBASIC3.98□□□□□ -1.77
TRIM38O00635 RNU4-79P-201ENST00000362764 141 ntBASIC3.98□□□□□ -1.77
TRIM38O00635 RNU6-278P-201ENST00000390945 109 ntBASIC3.98□□□□□ -1.77
TRIM38O00635 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.98□□□□□ -1.77
TRIM38O00635 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM38O00635 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.98□□□□□ -1.77
TRIM38O00635 AC009961.2-201ENST00000435771 251 ntBASIC3.98□□□□□ -1.77
TRIM38O00635 RPL26P6-201ENST00000440913 438 ntBASIC3.98□□□□□ -1.77
TRIM38O00635 RPS11P1-201ENST00000451072 473 ntBASIC3.98□□□□□ -1.77
TRIM38O00635 AC022364.2-201ENST00000457963 554 ntBASIC3.98□□□□□ -1.77
TRIM38O00635 RPS3AP14-201ENST00000483907 780 ntBASIC3.98□□□□□ -1.77
TRIM38O00635 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.98□□□□□ -1.77
TRIM38O00635 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.98□□□□□ -1.77
TRIM38O00635 SNORA31.22-201ENST00000517204 135 ntBASIC3.98□□□□□ -1.77
TRIM38O00635 TRMT10BP1-201ENST00000519377 943 ntBASIC3.98□□□□□ -1.77
TRIM38O00635 AC107934.1-201ENST00000522215 217 ntBASIC3.98□□□□□ -1.77
TRIM38O00635 AF235103.2-201ENST00000525753 346 ntBASIC3.98□□□□□ -1.77
TRIM38O00635 MTND1P35-201ENST00000526739 508 ntBASIC3.98□□□□□ -1.77
TRIM38O00635 AP001893.2-201ENST00000526949 202 ntBASIC3.98□□□□□ -1.77
TRIM38O00635 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.98□□□□□ -1.77
TRIM38O00635 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM38O00635 AC093027.1-201ENST00000546698 429 ntBASIC3.98□□□□□ -1.77
TRIM38O00635 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.98□□□□□ -1.77
TRIM38O00635 ARL2BPP2-201ENST00000550907 489 ntBASIC3.98□□□□□ -1.77
TRIM38O00635 CBX3P5-201ENST00000552017 521 ntBASIC3.98□□□□□ -1.77
TRIM38O00635 MED28P6-201ENST00000558776 231 ntBASIC3.98□□□□□ -1.77
TRIM38O00635 MIR3921-201ENST00000577308 85 ntBASIC3.98□□□□□ -1.77
TRIM38O00635 MIR3118-1-201ENST00000581787 76 ntBASIC3.98□□□□□ -1.77
TRIM38O00635 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.98□□□□□ -1.77
TRIM38O00635 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM38O00635 AP001330.4-201ENST00000604350 154 ntBASIC3.98□□□□□ -1.77
TRIM38O00635 AL592436.1-201ENST00000605135 558 ntBASIC3.98□□□□□ -1.77
TRIM38O00635 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM38O00635 MIR6868-201ENST00000611215 58 ntBASIC3.98□□□□□ -1.77
TRIM38O00635 TUG1_2.1-201ENST00000614234 87 ntBASIC3.98□□□□□ -1.77
TRIM38O00635 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.98□□□□□ -1.77
TRIM38O00635 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM38O00635 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM38O00635 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM38O00635 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
TRIM38O00635 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
TRIM38O00635 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.97□□□□□ -1.77
TRIM38O00635 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM38O00635 AP001486.2-201ENST00000561652 5113 ntBASIC3.97□□□□□ -1.77
TRIM38O00635 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM38O00635 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM38O00635 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM38O00635 Y_RNA.142-201ENST00000363491 102 ntBASIC3.97□□□□□ -1.77
TRIM38O00635 Y_RNA.296-201ENST00000364930 108 ntBASIC3.97□□□□□ -1.77
TRIM38O00635 SNORA73.2-201ENST00000364946 201 ntBASIC3.97□□□□□ -1.77
TRIM38O00635 Y_RNA.573-201ENST00000384763 105 ntBASIC3.97□□□□□ -1.77
TRIM38O00635 RPL23AP32-201ENST00000395315 459 ntBASIC3.97□□□□□ -1.77
TRIM38O00635 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.97□□□□□ -1.77
TRIM38O00635 RAB9AP3-201ENST00000412737 573 ntBASIC3.97□□□□□ -1.77
TRIM38O00635 AMD1P2-201ENST00000412936 992 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms