Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AL035407.1-201ENST00000429211 571 ntBASIC1.63□□□□□ -2.15
SDCBPO00560 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.63□□□□□ -2.15
SDCBPO00560 FGF7P5-201ENST00000441829 291 ntBASIC1.63□□□□□ -2.15
SDCBPO00560 FAM103A2P-201ENST00000444122 354 ntBASIC1.63□□□□□ -2.15
SDCBPO00560 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.63□□□□□ -2.15
SDCBPO00560 GXYLT1P1-201ENST00000446657 490 ntBASIC1.63□□□□□ -2.15
SDCBPO00560 AL592447.1-201ENST00000447592 540 ntBASIC1.63□□□□□ -2.15
SDCBPO00560 COX6CP18-201ENST00000448769 222 ntBASIC1.63□□□□□ -2.15
SDCBPO00560 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.63□□□□□ -2.15
SDCBPO00560 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.63□□□□□ -2.15
SDCBPO00560 MTND4LP3-201ENST00000468320 276 ntBASIC1.63□□□□□ -2.15
SDCBPO00560 XACT-201ENST00000468762 497 ntTSL 5 BASIC1.63□□□□□ -2.15
SDCBPO00560 ANXA2P1-201ENST00000505539 926 ntBASIC1.63□□□□□ -2.15
SDCBPO00560 AC096571.1-202ENST00000506634 735 ntBASIC1.63□□□□□ -2.15
SDCBPO00560 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.63□□□□□ -2.15
SDCBPO00560 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.63□□□□□ -2.15
SDCBPO00560 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.63□□□□□ -2.15
SDCBPO00560 SNORA76.2-201ENST00000517095 137 ntBASIC1.63□□□□□ -2.15
SDCBPO00560 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.63□□□□□ -2.15
SDCBPO00560 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.63□□□□□ -2.15
SDCBPO00560 AC090502.2-201ENST00000549267 280 ntBASIC1.63□□□□□ -2.15
SDCBPO00560 AC008127.2-201ENST00000549925 1075 ntBASIC1.63□□□□□ -2.15
SDCBPO00560 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.63□□□□□ -2.15
SDCBPO00560 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC1.63□□□□□ -2.15
SDCBPO00560 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.63□□□□□ -2.15
SDCBPO00560 OR4H6P-202ENST00000603819 340 ntBASIC1.63□□□□□ -2.15
SDCBPO00560 AC079791.1-201ENST00000605356 973 ntBASIC1.63□□□□□ -2.15
SDCBPO00560 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SDCBPO00560 AC080188.3-201ENST00000624842 748 ntBASIC1.63□□□□□ -2.15
SDCBPO00560 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.63□□□□□ -2.15
SDCBPO00560 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.63□□□□□ -2.15
SDCBPO00560 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.63□□□□□ -2.15
SDCBPO00560 OR4G11P-202ENST00000642116 1414 ntBASIC1.63□□□□□ -2.15
SDCBPO00560 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SDCBPO00560 SNORA3A-201ENST00000364113 130 ntBASIC1.62□□□□□ -2.15
SDCBPO00560 AP002784.2-201ENST00000397300 549 ntBASIC1.62□□□□□ -2.15
SDCBPO00560 MTCO2P31-201ENST00000402702 684 ntBASIC1.62□□□□□ -2.15
SDCBPO00560 RPS3AP24-201ENST00000407896 734 ntBASIC1.62□□□□□ -2.15
SDCBPO00560 RNU2-43P-201ENST00000410306 190 ntBASIC1.62□□□□□ -2.15
SDCBPO00560 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.62□□□□□ -2.15
SDCBPO00560 AL357078.2-201ENST00000416486 427 ntBASIC1.62□□□□□ -2.15
SDCBPO00560 BOLA3P4-201ENST00000418151 400 ntBASIC1.62□□□□□ -2.15
SDCBPO00560 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.62□□□□□ -2.15
SDCBPO00560 HMGN2P19-201ENST00000425149 265 ntBASIC1.62□□□□□ -2.15
SDCBPO00560 AL512637.2-201ENST00000431287 1256 ntBASIC1.62□□□□□ -2.15
SDCBPO00560 Z98742.2-201ENST00000431564 187 ntBASIC1.62□□□□□ -2.15
SDCBPO00560 TAAR7P-201ENST00000436141 242 ntBASIC1.62□□□□□ -2.15
SDCBPO00560 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.62□□□□□ -2.15
SDCBPO00560 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.62□□□□□ -2.15
SDCBPO00560 MTCO1P48-201ENST00000448024 1096 ntBASIC1.62□□□□□ -2.15
SDCBPO00560 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
SDCBPO00560 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.62□□□□□ -2.15
SDCBPO00560 KLRA1P-201ENST00000503499 986 ntBASIC1.62□□□□□ -2.15
SDCBPO00560 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.62□□□□□ -2.15
SDCBPO00560 AC118282.2-201ENST00000508739 374 ntBASIC1.62□□□□□ -2.15
SDCBPO00560 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.62□□□□□ -2.15
SDCBPO00560 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.62□□□□□ -2.15
SDCBPO00560 SNORA48.10-201ENST00000516965 160 ntBASIC1.62□□□□□ -2.15
SDCBPO00560 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.62□□□□□ -2.15
SDCBPO00560 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.62□□□□□ -2.15
SDCBPO00560 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.62□□□□□ -2.15
SDCBPO00560 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.62□□□□□ -2.15
SDCBPO00560 AL138976.2-201ENST00000563989 694 ntBASIC1.62□□□□□ -2.15
SDCBPO00560 AC093519.1-201ENST00000566109 298 ntBASIC1.62□□□□□ -2.15
SDCBPO00560 MIR3921-201ENST00000577308 85 ntBASIC1.62□□□□□ -2.15
SDCBPO00560 AC005498.1-201ENST00000592125 465 ntBASIC1.62□□□□□ -2.15
SDCBPO00560 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.62□□□□□ -2.15
SDCBPO00560 AC002487.1-201ENST00000604565 994 ntBASIC1.62□□□□□ -2.15
SDCBPO00560 SNORD14A-201ENST00000606526 91 ntBASIC1.62□□□□□ -2.15
SDCBPO00560 AC103710.1-201ENST00000610003 901 ntBASIC1.62□□□□□ -2.15
SDCBPO00560 AC005332.10-201ENST00000612725 619 ntBASIC1.62□□□□□ -2.15
SDCBPO00560 AL136981.2-201ENST00000617319 734 ntBASIC1.62□□□□□ -2.15
SDCBPO00560 AC244517.12-201ENST00000623581 663 ntBASIC1.62□□□□□ -2.15
SDCBPO00560 AC073308.1-201ENST00000623696 305 ntBASIC1.62□□□□□ -2.15
SDCBPO00560 AC010872.1-201ENST00000624225 675 ntBASIC1.62□□□□□ -2.15
SDCBPO00560 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.62□□□□□ -2.15
SDCBPO00560 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SDCBPO00560 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
SDCBPO00560 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SDCBPO00560 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.61□□□□□ -2.15
SDCBPO00560 AC022336.2-201ENST00000568966 2538 ntBASIC1.61□□□□□ -2.15
SDCBPO00560 AC104454.1-201ENST00000421341 1401 ntBASIC1.61□□□□□ -2.15
SDCBPO00560 RNU6-839P-201ENST00000363347 108 ntBASIC1.61□□□□□ -2.15
SDCBPO00560 MIR217-201ENST00000384817 110 ntBASIC1.61□□□□□ -2.15
SDCBPO00560 UBE2V1P15-201ENST00000407776 448 ntBASIC1.61□□□□□ -2.15
SDCBPO00560 AL030996.1-201ENST00000411430 235 ntBASIC1.61□□□□□ -2.15
SDCBPO00560 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.61□□□□□ -2.15
SDCBPO00560 AL356379.1-201ENST00000414105 126 ntBASIC1.61□□□□□ -2.15
SDCBPO00560 TAF13P2-201ENST00000416876 286 ntBASIC1.61□□□□□ -2.15
SDCBPO00560 AC098614.2-201ENST00000426040 255 ntBASIC1.61□□□□□ -2.15
SDCBPO00560 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.61□□□□□ -2.15
SDCBPO00560 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.61□□□□□ -2.15
SDCBPO00560 AL445646.1-201ENST00000431784 216 ntBASIC1.61□□□□□ -2.15
SDCBPO00560 MTCYBP45-201ENST00000435243 565 ntBASIC1.61□□□□□ -2.15
SDCBPO00560 AC241584.1-201ENST00000438469 1241 ntBASIC1.61□□□□□ -2.15
SDCBPO00560 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.61□□□□□ -2.15
SDCBPO00560 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.61□□□□□ -2.15
SDCBPO00560 TPRKBP1-201ENST00000456243 481 ntBASIC1.61□□□□□ -2.15
SDCBPO00560 AC092757.1-201ENST00000467293 467 ntBASIC1.61□□□□□ -2.15
SDCBPO00560 LARP1BP2-201ENST00000486594 519 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms