Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.24□□□□□ -1.89
O00370 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
O00370 AC103988.1-201ENST00000566382 2177 ntBASIC3.24□□□□□ -1.89
O00370 AC093908.1-201ENST00000623125 8092 ntBASIC3.24□□□□□ -1.89
O00370 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
O00370 RNU6-1078P-201ENST00000364522 103 ntBASIC3.24□□□□□ -1.89
O00370 U3.20-201ENST00000390909 217 ntBASIC3.24□□□□□ -1.89
O00370 AL136372.1-201ENST00000403060 228 ntBASIC3.24□□□□□ -1.89
O00370 RN7SKP220-201ENST00000410611 288 ntBASIC3.24□□□□□ -1.89
O00370 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.24□□□□□ -1.89
O00370 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.24□□□□□ -1.89
O00370 CCDC58P2-201ENST00000417131 366 ntBASIC3.24□□□□□ -1.89
O00370 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.24□□□□□ -1.89
O00370 EZH2P1-201ENST00000431167 291 ntBASIC3.24□□□□□ -1.89
O00370 RPL37P21-201ENST00000435890 276 ntBASIC3.24□□□□□ -1.89
O00370 UBE2V1P13-201ENST00000436983 439 ntBASIC3.24□□□□□ -1.89
O00370 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.24□□□□□ -1.89
O00370 RPL22P17-201ENST00000438729 315 ntBASIC3.24□□□□□ -1.89
O00370 AL121871.1-201ENST00000443413 436 ntBASIC3.24□□□□□ -1.89
O00370 MTND2P4-201ENST00000445034 1004 ntBASIC3.24□□□□□ -1.89
O00370 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.24□□□□□ -1.89
O00370 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.24□□□□□ -1.89
O00370 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.24□□□□□ -1.89
O00370 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.24□□□□□ -1.89
O00370 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.24□□□□□ -1.89
O00370 BCRP9-201ENST00000605312 388 ntBASIC3.24□□□□□ -1.89
O00370 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.24□□□□□ -1.89
O00370 AC097065.2-201ENST00000608159 533 ntBASIC3.24□□□□□ -1.89
O00370 AC004908.3-201ENST00000610248 625 ntBASIC3.24□□□□□ -1.89
O00370 AC027807.2-201ENST00000616099 408 ntBASIC3.24□□□□□ -1.89
O00370 AC079597.1-201ENST00000624306 508 ntBASIC3.24□□□□□ -1.89
O00370 AC093010.3-201ENST00000570269 15214 ntBASIC3.24□□□□□ -1.89
O00370 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.24□□□□□ -1.89
O00370 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.24□□□□□ -1.89
O00370 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.23□□□□□ -1.89
O00370 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
O00370 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
O00370 RNU6-533P-201ENST00000384144 107 ntBASIC3.23□□□□□ -1.89
O00370 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
O00370 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
O00370 CCNG1P1-201ENST00000406783 885 ntBASIC3.23□□□□□ -1.89
O00370 RPS3AP24-201ENST00000407896 734 ntBASIC3.23□□□□□ -1.89
O00370 RNU2-43P-201ENST00000410306 190 ntBASIC3.23□□□□□ -1.89
O00370 BEND7P1-201ENST00000422058 457 ntBASIC3.23□□□□□ -1.89
O00370 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.23□□□□□ -1.89
O00370 BMI1P1-201ENST00000445879 941 ntBASIC3.23□□□□□ -1.89
O00370 COX6CP12-201ENST00000446748 202 ntBASIC3.23□□□□□ -1.89
O00370 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.23□□□□□ -1.89
O00370 AP000797.1-201ENST00000478870 387 ntBASIC3.23□□□□□ -1.89
O00370 VN1R104P-201ENST00000505115 1009 ntBASIC3.23□□□□□ -1.89
O00370 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
O00370 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
O00370 MTND5P13-201ENST00000513046 1079 ntBASIC3.23□□□□□ -1.89
O00370 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.23□□□□□ -1.89
O00370 AP003497.1-201ENST00000528472 562 ntBASIC3.23□□□□□ -1.89
O00370 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.23□□□□□ -1.89
O00370 AL133271.1-201ENST00000538229 291 ntBASIC3.23□□□□□ -1.89
O00370 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.23□□□□□ -1.89
O00370 AC125611.2-201ENST00000551907 647 ntBASIC3.23□□□□□ -1.89
O00370 AP001429.1-201ENST00000602568 530 ntBASIC3.23□□□□□ -1.89
O00370 AC112187.2-201ENST00000604345 283 ntBASIC3.23□□□□□ -1.89
O00370 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
O00370 AC002550.2-201ENST00000621246 394 ntBASIC3.23□□□□□ -1.89
O00370 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
O00370 MIR22-201ENST00000362190 85 ntBASIC3.22□□□□□ -1.89
O00370 RNU6-1027P-201ENST00000383998 107 ntBASIC3.22□□□□□ -1.89
O00370 RNU6-882P-201ENST00000391025 103 ntBASIC3.22□□□□□ -1.89
O00370 RNA5SP252-201ENST00000391131 119 ntBASIC3.22□□□□□ -1.89
O00370 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.22□□□□□ -1.89
O00370 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.22□□□□□ -1.89
O00370 AL365338.1-201ENST00000422282 858 ntBASIC3.22□□□□□ -1.89
O00370 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.22□□□□□ -1.89
O00370 AC129850.1-201ENST00000436203 508 ntBASIC3.22□□□□□ -1.89
O00370 CYCSP32-201ENST00000440548 321 ntBASIC3.22□□□□□ -1.89
O00370 AC118469.1-201ENST00000442943 488 ntBASIC3.22□□□□□ -1.89
O00370 AP000936.2-201ENST00000447151 681 ntBASIC3.22□□□□□ -1.89
O00370 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.22□□□□□ -1.89
O00370 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.22□□□□□ -1.89
O00370 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.22□□□□□ -1.89
O00370 SNRPGP9-201ENST00000456025 225 ntBASIC3.22□□□□□ -1.89
O00370 AL359385.1-201ENST00000456509 365 ntBASIC3.22□□□□□ -1.89
O00370 AC091179.1-201ENST00000461606 579 ntBASIC3.22□□□□□ -1.89
O00370 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
O00370 ARL4AP2-201ENST00000507378 601 ntBASIC3.22□□□□□ -1.89
O00370 AC091965.2-201ENST00000512324 613 ntBASIC3.22□□□□□ -1.89
O00370 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.22□□□□□ -1.89
O00370 AC117532.1-201ENST00000514638 323 ntBASIC3.22□□□□□ -1.89
O00370 SNORA70.16-201ENST00000516390 95 ntBASIC3.22□□□□□ -1.89
O00370 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.22□□□□□ -1.89
O00370 PSMA2P1-201ENST00000526365 646 ntBASIC3.22□□□□□ -1.89
O00370 AP000907.2-201ENST00000530827 353 ntBASIC3.22□□□□□ -1.89
O00370 DNAJC8P1-201ENST00000554535 372 ntBASIC3.22□□□□□ -1.89
O00370 AC091489.2-201ENST00000566263 604 ntBASIC3.22□□□□□ -1.89
O00370 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.22□□□□□ -1.89
O00370 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.22□□□□□ -1.89
O00370 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.22□□□□□ -1.89
O00370 AC110760.3-201ENST00000598794 467 ntBASIC3.22□□□□□ -1.89
O00370 AC012360.2-201ENST00000609349 391 ntBASIC3.22□□□□□ -1.89
O00370 AC069234.5-201ENST00000611056 416 ntBASIC3.22□□□□□ -1.89
O00370 AP003122.6-201ENST00000623831 495 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms