Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC007318.2-201ENST00000620999 243 ntBASIC2.82□□□□□ -1.96
PDLIM1O00151 AC017037.3-201ENST00000625016 472 ntBASIC2.82□□□□□ -1.96
PDLIM1O00151 AC019226.1-201ENST00000625666 515 ntBASIC2.82□□□□□ -1.96
PDLIM1O00151 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.82□□□□□ -1.96
PDLIM1O00151 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.82□□□□□ -1.96
PDLIM1O00151 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
PDLIM1O00151 AC008568.2-201ENST00000623862 2313 ntBASIC2.82□□□□□ -1.96
PDLIM1O00151 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
PDLIM1O00151 RPL9P7-201ENST00000330965 580 ntBASIC2.81□□□□□ -1.96
PDLIM1O00151 SNORA38.1-201ENST00000364172 131 ntBASIC2.81□□□□□ -1.96
PDLIM1O00151 Y_RNA.333-201ENST00000365274 102 ntBASIC2.81□□□□□ -1.96
PDLIM1O00151 RNU6-432P-201ENST00000384196 109 ntBASIC2.81□□□□□ -1.96
PDLIM1O00151 SNORA7.4-201ENST00000384249 137 ntBASIC2.81□□□□□ -1.96
PDLIM1O00151 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.81□□□□□ -1.96
PDLIM1O00151 MIR1290-201ENST00000408735 78 ntBASIC2.81□□□□□ -1.96
PDLIM1O00151 AL359704.1-201ENST00000411586 781 ntBASIC2.81□□□□□ -1.96
PDLIM1O00151 TPMTP3-201ENST00000411928 735 ntBASIC2.81□□□□□ -1.96
PDLIM1O00151 MTND1P21-201ENST00000412991 285 ntBASIC2.81□□□□□ -1.96
PDLIM1O00151 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.81□□□□□ -1.96
PDLIM1O00151 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.81□□□□□ -1.96
PDLIM1O00151 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.81□□□□□ -1.96
PDLIM1O00151 RSU1P2-202ENST00000437884 485 ntBASIC2.81□□□□□ -1.96
PDLIM1O00151 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.81□□□□□ -1.96
PDLIM1O00151 FAM103A2P-201ENST00000444122 354 ntBASIC2.81□□□□□ -1.96
PDLIM1O00151 AL606662.1-201ENST00000445763 553 ntBASIC2.81□□□□□ -1.96
PDLIM1O00151 ST13P20-201ENST00000447996 1065 ntBASIC2.81□□□□□ -1.96
PDLIM1O00151 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.81□□□□□ -1.96
PDLIM1O00151 AC092798.1-201ENST00000458542 409 ntBASIC2.81□□□□□ -1.96
PDLIM1O00151 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.81□□□□□ -1.96
PDLIM1O00151 RNU6-840P-201ENST00000517275 65 ntBASIC2.81□□□□□ -1.96
PDLIM1O00151 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PDLIM1O00151 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.81□□□□□ -1.96
PDLIM1O00151 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.81□□□□□ -1.96
PDLIM1O00151 AC087276.1-201ENST00000529659 480 ntBASIC2.81□□□□□ -1.96
PDLIM1O00151 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PDLIM1O00151 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.81□□□□□ -1.96
PDLIM1O00151 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.81□□□□□ -1.96
PDLIM1O00151 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PDLIM1O00151 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.81□□□□□ -1.96
PDLIM1O00151 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.81□□□□□ -1.96
PDLIM1O00151 AC009094.1-201ENST00000564443 426 ntBASIC2.81□□□□□ -1.96
PDLIM1O00151 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PDLIM1O00151 AC011260.1-201ENST00000578420 472 ntBASIC2.81□□□□□ -1.96
PDLIM1O00151 AC012493.2-201ENST00000595083 291 ntBASIC2.81□□□□□ -1.96
PDLIM1O00151 VN1R90P-201ENST00000595717 726 ntBASIC2.81□□□□□ -1.96
PDLIM1O00151 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.81□□□□□ -1.96
PDLIM1O00151 AC018714.1-201ENST00000605028 208 ntBASIC2.81□□□□□ -1.96
PDLIM1O00151 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PDLIM1O00151 MIR8057-201ENST00000620957 69 ntBASIC2.81□□□□□ -1.96
PDLIM1O00151 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.81□□□□□ -1.96
PDLIM1O00151 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.81□□□□□ -1.96
PDLIM1O00151 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.81□□□□□ -1.96
PDLIM1O00151 DDX10P1-201ENST00000448545 1933 ntBASIC2.81□□□□□ -1.96
PDLIM1O00151 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PDLIM1O00151 AC009902.3-201ENST00000606235 2172 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 AC092125.1-201ENST00000562568 1995 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PDLIM1O00151 RNU6-1180P-201ENST00000364935 107 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 MIR181A2-201ENST00000384863 110 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 SNORD67-201ENST00000390833 111 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 AC119751.3-201ENST00000399720 670 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 AC011233.1-201ENST00000422812 283 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 AC018630.2-202ENST00000422992 927 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 AC234781.2-201ENST00000426370 994 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 AL445669.1-201ENST00000426743 755 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 AC008850.1-201ENST00000427546 362 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 AL512649.1-201ENST00000428997 581 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.8□□□□□ -1.96
PDLIM1O00151 AL356867.1-201ENST00000429623 299 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 AC092573.2-201ENST00000434546 243 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 MTCYBP39-201ENST00000437562 491 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 MTND5P2-201ENST00000442927 1142 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.8□□□□□ -1.96
PDLIM1O00151 AL359385.1-201ENST00000456509 365 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 RN7SL863P-201ENST00000462370 296 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.8□□□□□ -1.96
PDLIM1O00151 SNORA31.11-201ENST00000516528 139 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 RPPH1-2P-201ENST00000516688 293 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.8□□□□□ -1.96
PDLIM1O00151 LRRC34P1-201ENST00000542742 915 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.8□□□□□ -1.96
PDLIM1O00151 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.8□□□□□ -1.96
PDLIM1O00151 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.8□□□□□ -1.96
PDLIM1O00151 GLUD1P4-201ENST00000590914 418 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 NUTF2P8-201ENST00000604593 363 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 AL161756.2-201ENST00000604597 246 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 AC026790.2-201ENST00000606282 430 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 AC107214.2-201ENST00000608204 634 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 AP000254.1-201ENST00000609934 520 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 AL603758.1-201ENST00000618654 241 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
PDLIM1O00151 AC131159.1-201ENST00000621854 213 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 AP002791.1-201ENST00000623291 381 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 AC018692.3-201ENST00000623929 123 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 AC007671.2-201ENST00000637344 619 ntBASIC2.8□□□□□ -1.96
PDLIM1O00151 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms