Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.58□□□□□ -2
TRIM49D1C9J1S8 RNVU1-3-201ENST00000364313 161 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 RNU1-140P-201ENST00000365040 165 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 RNU6-723P-201ENST00000383973 107 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 MT-TC-201ENST00000387405 66 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 MTCYBP36-201ENST00000404146 440 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 RNA5SP181-201ENST00000410246 98 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 RAD23BP2-201ENST00000416003 1207 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.58□□□□□ -2
TRIM49D1C9J1S8 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.58□□□□□ -2
TRIM49D1C9J1S8 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.58□□□□□ -2
TRIM49D1C9J1S8 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.58□□□□□ -2
TRIM49D1C9J1S8 MTND4P32-201ENST00000437189 1237 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.58□□□□□ -2
TRIM49D1C9J1S8 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.58□□□□□ -2
TRIM49D1C9J1S8 AL135938.1-201ENST00000443141 297 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.58□□□□□ -2
TRIM49D1C9J1S8 MTND2P4-201ENST00000445034 1004 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 GDI2P2-201ENST00000445131 608 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 NANOGNBP1-201ENST00000448444 480 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.58□□□□□ -2
TRIM49D1C9J1S8 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.58□□□□□ -2
TRIM49D1C9J1S8 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.58□□□□□ -2
TRIM49D1C9J1S8 OR6K1P-201ENST00000456766 971 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 AC090453.1-201ENST00000495560 436 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.58□□□□□ -2
TRIM49D1C9J1S8 AC105914.1-201ENST00000511798 226 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.58□□□□□ -2
TRIM49D1C9J1S8 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.58□□□□□ -2
TRIM49D1C9J1S8 SNORA31.21-201ENST00000517180 77 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.58□□□□□ -2
TRIM49D1C9J1S8 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.58□□□□□ -2
TRIM49D1C9J1S8 AC013828.2-201ENST00000532487 235 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.58□□□□□ -2
TRIM49D1C9J1S8 OR6C7P-201ENST00000547875 934 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 AC126177.3-201ENST00000551839 688 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.58□□□□□ -2
TRIM49D1C9J1S8 AC012414.6-201ENST00000568241 401 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.58□□□□□ -2
TRIM49D1C9J1S8 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.58□□□□□ -2
TRIM49D1C9J1S8 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.58□□□□□ -2
TRIM49D1C9J1S8 VN1R92P-201ENST00000598511 928 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 AF131215.7-201ENST00000602443 707 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 Z99497.2-201ENST00000603634 310 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 BCRP9-201ENST00000605312 388 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 AC097468.3-201ENST00000607956 456 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 AC004009.2-201ENST00000623016 728 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 AC078883.4-201ENST00000623218 367 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.58□□□□□ -2
TRIM49D1C9J1S8 MIR3974-201ENST00000637126 96 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
TRIM49D1C9J1S8 AL390862.1-201ENST00000635467 1469 ntBASIC2.58□□□□□ -2
TRIM49D1C9J1S8 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
TRIM49D1C9J1S8 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
TRIM49D1C9J1S8 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TRIM49D1C9J1S8 RNU6-500P-201ENST00000362349 107 ntBASIC2.57□□□□□ -2
TRIM49D1C9J1S8 RNA5SP88-201ENST00000365560 109 ntBASIC2.57□□□□□ -2
TRIM49D1C9J1S8 SNORA44-201ENST00000384584 132 ntBASIC2.57□□□□□ -2
TRIM49D1C9J1S8 RNU6-253P-201ENST00000384730 105 ntBASIC2.57□□□□□ -2
TRIM49D1C9J1S8 RNU2-47P-201ENST00000410649 186 ntBASIC2.57□□□□□ -2
TRIM49D1C9J1S8 RNU2-15P-201ENST00000410692 191 ntBASIC2.57□□□□□ -2
TRIM49D1C9J1S8 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.57□□□□□ -2
TRIM49D1C9J1S8 RPLP0P7-201ENST00000416050 667 ntBASIC2.57□□□□□ -2
TRIM49D1C9J1S8 AC016907.1-201ENST00000419483 435 ntBASIC2.57□□□□□ -2
TRIM49D1C9J1S8 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
TRIM49D1C9J1S8 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.57□□□□□ -2
TRIM49D1C9J1S8 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.57□□□□□ -2
TRIM49D1C9J1S8 SNRPEP4-201ENST00000435815 279 ntBASIC2.57□□□□□ -2
TRIM49D1C9J1S8 RPS12P2-201ENST00000439728 269 ntBASIC2.57□□□□□ -2
TRIM49D1C9J1S8 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.57□□□□□ -2
TRIM49D1C9J1S8 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.57□□□□□ -2
TRIM49D1C9J1S8 AL122001.1-201ENST00000457027 370 ntBASIC2.57□□□□□ -2
TRIM49D1C9J1S8 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.57□□□□□ -2
TRIM49D1C9J1S8 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.57□□□□□ -2
TRIM49D1C9J1S8 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.57□□□□□ -2
TRIM49D1C9J1S8 AC080014.1-201ENST00000496877 1201 ntBASIC2.57□□□□□ -2
TRIM49D1C9J1S8 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.57□□□□□ -2
TRIM49D1C9J1S8 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.57□□□□□ -2
TRIM49D1C9J1S8 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.57□□□□□ -2
TRIM49D1C9J1S8 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.57□□□□□ -2
TRIM49D1C9J1S8 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.57□□□□□ -2
TRIM49D1C9J1S8 MTND5P4-201ENST00000514978 288 ntBASIC2.57□□□□□ -2
TRIM49D1C9J1S8 RNU6-56P-201ENST00000516986 93 ntBASIC2.57□□□□□ -2
TRIM49D1C9J1S8 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
TRIM49D1C9J1S8 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.57□□□□□ -2
TRIM49D1C9J1S8 AC087276.1-201ENST00000529659 480 ntBASIC2.57□□□□□ -2
TRIM49D1C9J1S8 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.57□□□□□ -2
TRIM49D1C9J1S8 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.57□□□□□ -2
TRIM49D1C9J1S8 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.57□□□□□ -2
TRIM49D1C9J1S8 HSPE1P3-201ENST00000559254 309 ntBASIC2.57□□□□□ -2
TRIM49D1C9J1S8 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.57□□□□□ -2
TRIM49D1C9J1S8 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.57□□□□□ -2
TRIM49D1C9J1S8 AC106782.4-201ENST00000568264 210 ntBASIC2.57□□□□□ -2
TRIM49D1C9J1S8 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.57□□□□□ -2
TRIM49D1C9J1S8 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.57□□□□□ -2
TRIM49D1C9J1S8 AL451007.1-201ENST00000595491 289 ntBASIC2.57□□□□□ -2
TRIM49D1C9J1S8 BBIP1P1-201ENST00000602999 279 ntBASIC2.57□□□□□ -2
TRIM49D1C9J1S8 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms