Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
COL6A5A8TX70 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
COL6A5A8TX70 RNU6-288P-201ENST00000363690 104 ntBASIC1.02□□□□□ -2.25
COL6A5A8TX70 RNU4-31P-201ENST00000384211 141 ntBASIC1.02□□□□□ -2.25
COL6A5A8TX70 SNORA40.6-201ENST00000391153 128 ntBASIC1.02□□□□□ -2.25
COL6A5A8TX70 WARS2P1-201ENST00000429678 537 ntBASIC1.02□□□□□ -2.25
COL6A5A8TX70 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.02□□□□□ -2.25
COL6A5A8TX70 AC022431.1-201ENST00000450941 438 ntBASIC1.02□□□□□ -2.25
COL6A5A8TX70 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.02□□□□□ -2.25
COL6A5A8TX70 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.02□□□□□ -2.25
COL6A5A8TX70 RPS29P29-201ENST00000456396 171 ntBASIC1.02□□□□□ -2.25
COL6A5A8TX70 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.02□□□□□ -2.25
COL6A5A8TX70 AC104115.2-201ENST00000523026 687 ntBASIC1.02□□□□□ -2.25
COL6A5A8TX70 AP003033.1-201ENST00000527244 415 ntBASIC1.02□□□□□ -2.25
COL6A5A8TX70 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.02□□□□□ -2.25
COL6A5A8TX70 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
COL6A5A8TX70 Z82195.2-201ENST00000612348 18351 ntBASIC1.02□□□□□ -2.25
COL6A5A8TX70 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.02□□□□□ -2.25
COL6A5A8TX70 RNU4-52P-201ENST00000384209 138 ntBASIC1.02□□□□□ -2.25
COL6A5A8TX70 MIR320A-201ENST00000385302 82 ntBASIC1.02□□□□□ -2.25
COL6A5A8TX70 CYCSP33-201ENST00000414485 327 ntBASIC1.02□□□□□ -2.25
COL6A5A8TX70 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.02□□□□□ -2.25
COL6A5A8TX70 HSFY3P-201ENST00000444242 1191 ntBASIC1.02□□□□□ -2.25
COL6A5A8TX70 OR9N1P-202ENST00000494289 481 ntBASIC1.02□□□□□ -2.25
COL6A5A8TX70 RN7SKP265-201ENST00000516448 223 ntBASIC1.02□□□□□ -2.25
COL6A5A8TX70 RNU1-92P-201ENST00000517017 135 ntBASIC1.02□□□□□ -2.25
COL6A5A8TX70 SCARNA1-201ENST00000517138 166 ntBASIC1.02□□□□□ -2.25
COL6A5A8TX70 AC121758.2-201ENST00000553271 193 ntBASIC1.02□□□□□ -2.25
COL6A5A8TX70 MIR3660-201ENST00000584845 100 ntBASIC1.02□□□□□ -2.25
COL6A5A8TX70 AC091057.2-201ENST00000602594 792 ntBASIC1.02□□□□□ -2.25
COL6A5A8TX70 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
COL6A5A8TX70 ZNF33CP-201ENST00000432492 2030 ntBASIC1.02□□□□□ -2.25
COL6A5A8TX70 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.02□□□□□ -2.25
COL6A5A8TX70 MIR330-201ENST00000362196 94 ntBASIC1.02□□□□□ -2.25
COL6A5A8TX70 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.02□□□□□ -2.25
COL6A5A8TX70 Z95118.1-201ENST00000421372 247 ntBASIC1.02□□□□□ -2.25
COL6A5A8TX70 JTBP1-201ENST00000441314 247 ntBASIC1.02□□□□□ -2.25
COL6A5A8TX70 AC093752.1-206ENST00000511823 336 ntBASIC1.02□□□□□ -2.25
COL6A5A8TX70 HSPE1P4-201ENST00000550617 308 ntBASIC1.02□□□□□ -2.25
COL6A5A8TX70 MIR4474-201ENST00000579189 78 ntBASIC1.02□□□□□ -2.25
COL6A5A8TX70 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.02□□□□□ -2.25
COL6A5A8TX70 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
COL6A5A8TX70 XKRY2-202ENST00000623874 1581 ntBASIC1.01□□□□□ -2.25
COL6A5A8TX70 XKRY-202ENST00000624960 1581 ntBASIC1.01□□□□□ -2.25
COL6A5A8TX70 RNU6-39P-201ENST00000384344 107 ntBASIC1.01□□□□□ -2.25
COL6A5A8TX70 AC016769.3-201ENST00000396562 315 ntBASIC1.01□□□□□ -2.25
COL6A5A8TX70 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC1.01□□□□□ -2.25
COL6A5A8TX70 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.01□□□□□ -2.25
COL6A5A8TX70 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.01□□□□□ -2.25
COL6A5A8TX70 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
COL6A5A8TX70 SNORA18.2-201ENST00000383865 132 ntBASIC1.01□□□□□ -2.25
COL6A5A8TX70 BX682237.1-201ENST00000415016 335 ntBASIC1.01□□□□□ -2.25
COL6A5A8TX70 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC1.01□□□□□ -2.25
COL6A5A8TX70 SNORD108-201ENST00000459332 71 ntBASIC1.01□□□□□ -2.25
COL6A5A8TX70 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.01□□□□□ -2.25
COL6A5A8TX70 HSPE1P3-201ENST00000559254 309 ntBASIC1.01□□□□□ -2.25
COL6A5A8TX70 AC084757.1-201ENST00000559987 490 ntBASIC1.01□□□□□ -2.25
COL6A5A8TX70 GLUD1P4-201ENST00000590914 418 ntBASIC1.01□□□□□ -2.25
COL6A5A8TX70 AC097504.2-201ENST00000608088 454 ntBASIC1.01□□□□□ -2.25
COL6A5A8TX70 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1□□□□□ -2.25
COL6A5A8TX70 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
COL6A5A8TX70 AL356057.2-201ENST00000403318 432 ntBASIC1□□□□□ -2.25
COL6A5A8TX70 MIR1207-201ENST00000408249 87 ntBASIC1□□□□□ -2.25
COL6A5A8TX70 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1□□□□□ -2.25
COL6A5A8TX70 HSPE1P1-201ENST00000421494 318 ntBASIC1□□□□□ -2.25
COL6A5A8TX70 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1□□□□□ -2.25
COL6A5A8TX70 HMGN2P20-201ENST00000437531 273 ntBASIC1□□□□□ -2.25
COL6A5A8TX70 AC016691.1-201ENST00000441321 413 ntBASIC1□□□□□ -2.25
COL6A5A8TX70 AL109741.2-201ENST00000455561 343 ntBASIC1□□□□□ -2.25
COL6A5A8TX70 RNA5SP384-201ENST00000516615 116 ntBASIC1□□□□□ -2.25
COL6A5A8TX70 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1□□□□□ -2.25
COL6A5A8TX70 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1□□□□□ -2.25
COL6A5A8TX70 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1□□□□□ -2.25
COL6A5A8TX70 AL031775.1-201ENST00000607014 887 ntBASIC1□□□□□ -2.25
COL6A5A8TX70 MIR2909-201ENST00000617113 69 ntBASIC1□□□□□ -2.25
COL6A5A8TX70 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1□□□□□ -2.25
COL6A5A8TX70 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1□□□□□ -2.25
COL6A5A8TX70 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
COL6A5A8TX70 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
COL6A5A8TX70 MIRLET7G-201ENST00000362280 84 ntBASIC1□□□□□ -2.25
COL6A5A8TX70 Y_RNA.572-201ENST00000384757 98 ntBASIC1□□□□□ -2.25
COL6A5A8TX70 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1□□□□□ -2.25
COL6A5A8TX70 AC087343.1-201ENST00000477341 475 ntBASIC1□□□□□ -2.25
COL6A5A8TX70 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
COL6A5A8TX70 AC073264.1-201ENST00000411508 416 ntBASIC0.99□□□□□ -2.25
COL6A5A8TX70 AC239798.3-201ENST00000454459 408 ntBASIC0.99□□□□□ -2.25
COL6A5A8TX70 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC0.99□□□□□ -2.25
COL6A5A8TX70 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC0.99□□□□□ -2.25
COL6A5A8TX70 MTND4LP24-201ENST00000572277 291 ntBASIC0.99□□□□□ -2.25
COL6A5A8TX70 AC005498.1-201ENST00000592125 465 ntBASIC0.99□□□□□ -2.25
COL6A5A8TX70 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
COL6A5A8TX70 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
COL6A5A8TX70 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC0.99□□□□□ -2.25
COL6A5A8TX70 AC018630.2-201ENST00000534866 2403 ntBASIC0.99□□□□□ -2.25
COL6A5A8TX70 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
COL6A5A8TX70 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
COL6A5A8TX70 RNU6-173P-201ENST00000364215 104 ntBASIC0.99□□□□□ -2.25
COL6A5A8TX70 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
COL6A5A8TX70 AC092447.6-201ENST00000414578 210 ntBASIC0.99□□□□□ -2.25
COL6A5A8TX70 SUMO1P4-201ENST00000429430 302 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms