Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 AC005410.1-202ENST00000460347 485 ntBASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 AC055731.1-201ENST00000474387 401 ntBASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 AC098862.1-201ENST00000504991 413 ntBASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 GLYCAM1-201ENST00000546596 285 ntBASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 AC025918.2-201ENST00000558683 763 ntBASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 MIR4287-201ENST00000579398 78 ntBASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 AC012254.4-201ENST00000588843 273 ntBASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 AL109918.3-201ENST00000603072 338 ntBASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 AL161423.1-201ENST00000613700 262 ntBASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 AC092140.2-201ENST00000618027 521 ntBASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 AC004520.1-201ENST00000608362 1413 ntBASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 Y_RNA.140-201ENST00000363474 103 ntBASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 SNORD14B-201ENST00000364533 90 ntBASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 U8.14-201ENST00000390843 143 ntBASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 AL033519.2-201ENST00000403958 392 ntBASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 RN7SKP284-201ENST00000411002 343 ntBASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 AP1B1P2-201ENST00000416196 106 ntBASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 AC009414.1-201ENST00000427200 443 ntBASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 MTCYBP34-201ENST00000439552 670 ntBASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 AL513321.1-201ENST00000441175 761 ntBASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 AC004022.1-201ENST00000447766 1066 ntBASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 TRGVB-201ENST00000453257 471 ntBASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 AC096992.1-201ENST00000459808 709 ntBASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 AC055855.1-201ENST00000489563 579 ntBASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 RPS27P26-201ENST00000494583 239 ntBASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 RNU6-970P-201ENST00000516312 107 ntBASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 SNORA31.18-201ENST00000517043 134 ntBASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 HSBP1P1-201ENST00000555205 166 ntBASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 UCA1.1-201ENST00000620952 75 ntBASIC0.98□□□□□ -2.25
CPSF4LA6NMK7 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.97□□□□□ -2.25
CPSF4LA6NMK7 SNORA68.1-201ENST00000364537 132 ntBASIC0.97□□□□□ -2.25
CPSF4LA6NMK7 RNU6-1293P-201ENST00000384077 107 ntBASIC0.97□□□□□ -2.25
CPSF4LA6NMK7 TXNP7-201ENST00000406296 293 ntBASIC0.97□□□□□ -2.25
CPSF4LA6NMK7 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC0.97□□□□□ -2.25
CPSF4LA6NMK7 RPS29P28-201ENST00000446439 141 ntBASIC0.97□□□□□ -2.25
CPSF4LA6NMK7 MTCO1P48-201ENST00000448024 1096 ntBASIC0.97□□□□□ -2.25
CPSF4LA6NMK7 AC074029.2-201ENST00000551045 634 ntBASIC0.97□□□□□ -2.25
CPSF4LA6NMK7 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.97□□□□□ -2.25
CPSF4LA6NMK7 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.97□□□□□ -2.25
CPSF4LA6NMK7 SNORD114-21-201ENST00000606412 72 ntBASIC0.97□□□□□ -2.25
CPSF4LA6NMK7 MIR6078-201ENST00000611069 100 ntBASIC0.97□□□□□ -2.25
CPSF4LA6NMK7 AC025594.3-201ENST00000613068 790 ntBASIC0.97□□□□□ -2.25
CPSF4LA6NMK7 AC005296.1-201ENST00000616145 209 ntBASIC0.97□□□□□ -2.25
CPSF4LA6NMK7 AL445493.3-201ENST00000619568 477 ntBASIC0.97□□□□□ -2.25
CPSF4LA6NMK7 RNU6-156P-201ENST00000621869 107 ntBASIC0.97□□□□□ -2.25
CPSF4LA6NMK7 MKKS-204ENST00000639674 192 ntBASIC0.97□□□□□ -2.25
CPSF4LA6NMK7 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC0.97□□□□□ -2.25
CPSF4LA6NMK7 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC0.97□□□□□ -2.25
CPSF4LA6NMK7 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC0.97□□□□□ -2.25
CPSF4LA6NMK7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 MIR378A-201ENST00000362177 66 ntBASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 MIR150-201ENST00000385048 84 ntBASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 RNA5SP450-201ENST00000411206 102 ntBASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 AC004965.1-201ENST00000413033 213 ntBASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 AC079780.1-201ENST00000428259 207 ntBASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 AL590233.1-201ENST00000430017 456 ntBASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 AL645638.1-201ENST00000440519 361 ntBASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 COX6CP18-201ENST00000448769 222 ntBASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 AC005297.2-201ENST00000450430 606 ntBASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 HMGN2P18-201ENST00000450680 270 ntBASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 MTATP6P7-201ENST00000453315 681 ntBASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 snoU13.3-201ENST00000459441 104 ntBASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 MIR3616-201ENST00000584070 92 ntBASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 AC007229.1-201ENST00000590455 412 ntBASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 AC040174.2-201ENST00000602701 465 ntBASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 AL713998.2-201ENST00000604538 1198 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms