Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC093012.1-202ENST00000549403 582 ntBASIC4.55□□□□□ -1.68
CCDC66A2RUB6 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC66A2RUB6 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.55□□□□□ -1.68
CCDC66A2RUB6 AC069061.3-201ENST00000582254 823 ntBASIC4.55□□□□□ -1.68
CCDC66A2RUB6 AL022099.1-201ENST00000604551 712 ntBASIC4.55□□□□□ -1.68
CCDC66A2RUB6 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CCDC66A2RUB6 AC068831.8-201ENST00000620171 435 ntBASIC4.55□□□□□ -1.68
CCDC66A2RUB6 AC006065.5-201ENST00000623427 349 ntBASIC4.55□□□□□ -1.68
CCDC66A2RUB6 MIR4275-201ENST00000636486 87 ntBASIC4.55□□□□□ -1.68
CCDC66A2RUB6 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC66A2RUB6 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC66A2RUB6 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC66A2RUB6 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC66A2RUB6 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCDC66A2RUB6 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC66A2RUB6 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC66A2RUB6 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC66A2RUB6 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC66A2RUB6 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC66A2RUB6 Y_RNA.184-201ENST00000363884 108 ntBASIC4.54□□□□□ -1.68
CCDC66A2RUB6 U3.12-201ENST00000364498 214 ntBASIC4.54□□□□□ -1.68
CCDC66A2RUB6 RNU6-831P-201ENST00000384548 107 ntBASIC4.54□□□□□ -1.68
CCDC66A2RUB6 RPL30P2-201ENST00000414021 291 ntBASIC4.54□□□□□ -1.68
CCDC66A2RUB6 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC66A2RUB6 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.54□□□□□ -1.68
CCDC66A2RUB6 HSPE1P1-201ENST00000421494 318 ntBASIC4.54□□□□□ -1.68
CCDC66A2RUB6 RPL7P46-201ENST00000425129 740 ntBASIC4.54□□□□□ -1.68
CCDC66A2RUB6 RPL7L1P10-201ENST00000427790 463 ntBASIC4.54□□□□□ -1.68
CCDC66A2RUB6 AC090774.1-201ENST00000435925 246 ntBASIC4.54□□□□□ -1.68
CCDC66A2RUB6 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC66A2RUB6 CYCSP43-201ENST00000438233 310 ntBASIC4.54□□□□□ -1.68
CCDC66A2RUB6 HMGB1P18-201ENST00000438801 619 ntBASIC4.54□□□□□ -1.68
CCDC66A2RUB6 AC007677.1-201ENST00000445757 515 ntBASIC4.54□□□□□ -1.68
CCDC66A2RUB6 AC233279.1-201ENST00000455300 423 ntBASIC4.54□□□□□ -1.68
CCDC66A2RUB6 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC66A2RUB6 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC66A2RUB6 SNORD108-201ENST00000459332 71 ntBASIC4.54□□□□□ -1.68
CCDC66A2RUB6 RN7SL93P-201ENST00000463035 293 ntBASIC4.54□□□□□ -1.68
CCDC66A2RUB6 RPL35AP15-201ENST00000468042 339 ntBASIC4.54□□□□□ -1.68
CCDC66A2RUB6 RN7SL459P-201ENST00000481078 302 ntBASIC4.54□□□□□ -1.68
CCDC66A2RUB6 CEACAMP10-202ENST00000495431 496 ntBASIC4.54□□□□□ -1.68
CCDC66A2RUB6 AC098591.2-201ENST00000510152 315 ntBASIC4.54□□□□□ -1.68
CCDC66A2RUB6 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC66A2RUB6 FTH1P9-201ENST00000513251 355 ntBASIC4.54□□□□□ -1.68
CCDC66A2RUB6 Y_RNA.691-201ENST00000516611 103 ntBASIC4.54□□□□□ -1.68
CCDC66A2RUB6 RNU6-1153P-201ENST00000516760 105 ntBASIC4.54□□□□□ -1.68
CCDC66A2RUB6 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCDC66A2RUB6 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC66A2RUB6 RNA5SP108-201ENST00000605921 117 ntBASIC4.54□□□□□ -1.68
CCDC66A2RUB6 AL589994.2-201ENST00000621124 579 ntBASIC4.54□□□□□ -1.68
CCDC66A2RUB6 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC66A2RUB6 AC103710.2-202ENST00000641454 2853 ntBASIC4.54□□□□□ -1.68
CCDC66A2RUB6 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC66A2RUB6 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
CCDC66A2RUB6 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC66A2RUB6 RNU1-18P-201ENST00000363062 164 ntBASIC4.53□□□□□ -1.68
CCDC66A2RUB6 Y_RNA.373-201ENST00000365600 103 ntBASIC4.53□□□□□ -1.68
CCDC66A2RUB6 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC66A2RUB6 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC66A2RUB6 RNU6-946P-201ENST00000383878 107 ntBASIC4.53□□□□□ -1.68
CCDC66A2RUB6 Y_RNA.530-201ENST00000384587 101 ntBASIC4.53□□□□□ -1.68
CCDC66A2RUB6 MIR141-201ENST00000384975 95 ntBASIC4.53□□□□□ -1.68
CCDC66A2RUB6 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CCDC66A2RUB6 AC110754.1-201ENST00000399740 601 ntBASIC4.53□□□□□ -1.68
CCDC66A2RUB6 AC097374.1-203ENST00000400783 485 ntBASIC4.53□□□□□ -1.68
CCDC66A2RUB6 AL592114.1-201ENST00000403842 483 ntBASIC4.53□□□□□ -1.68
CCDC66A2RUB6 BX323014.1-201ENST00000412876 237 ntBASIC4.53□□□□□ -1.68
CCDC66A2RUB6 AL451054.2-201ENST00000420896 202 ntBASIC4.53□□□□□ -1.68
CCDC66A2RUB6 PPP1R11P2-201ENST00000423543 382 ntBASIC4.53□□□□□ -1.68
CCDC66A2RUB6 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC66A2RUB6 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC66A2RUB6 RPL23AP89-201ENST00000439324 255 ntBASIC4.53□□□□□ -1.68
CCDC66A2RUB6 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC66A2RUB6 AC009220.1-201ENST00000451614 275 ntBASIC4.53□□□□□ -1.68
CCDC66A2RUB6 DHFRP3-201ENST00000455595 559 ntBASIC4.53□□□□□ -1.68
CCDC66A2RUB6 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC66A2RUB6 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CCDC66A2RUB6 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC66A2RUB6 AC117522.3-201ENST00000507974 584 ntBASIC4.53□□□□□ -1.68
CCDC66A2RUB6 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC66A2RUB6 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.53□□□□□ -1.68
CCDC66A2RUB6 RAB9BP1-201ENST00000519581 626 ntBASIC4.53□□□□□ -1.68
CCDC66A2RUB6 AC109635.4-202ENST00000531666 412 ntBASIC4.53□□□□□ -1.68
CCDC66A2RUB6 HPRT1P3-201ENST00000539521 576 ntBASIC4.53□□□□□ -1.68
CCDC66A2RUB6 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.53□□□□□ -1.68
CCDC66A2RUB6 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.53□□□□□ -1.68
CCDC66A2RUB6 AL118558.2-201ENST00000556294 238 ntBASIC4.53□□□□□ -1.68
CCDC66A2RUB6 AC026464.5-201ENST00000562497 722 ntBASIC4.53□□□□□ -1.68
CCDC66A2RUB6 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC66A2RUB6 AC010928.3-201ENST00000587712 541 ntBASIC4.53□□□□□ -1.68
CCDC66A2RUB6 AL022345.1-201ENST00000607292 135 ntBASIC4.53□□□□□ -1.68
CCDC66A2RUB6 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.53□□□□□ -1.68
CCDC66A2RUB6 AC092807.2-201ENST00000609367 243 ntBASIC4.53□□□□□ -1.68
CCDC66A2RUB6 AC104237.2-201ENST00000612456 443 ntBASIC4.53□□□□□ -1.68
CCDC66A2RUB6 AC004696.1-201ENST00000614345 607 ntBASIC4.53□□□□□ -1.68
CCDC66A2RUB6 AL021997.2-201ENST00000615674 271 ntBASIC4.53□□□□□ -1.68
CCDC66A2RUB6 AC007546.1-201ENST00000619452 559 ntBASIC4.53□□□□□ -1.68
CCDC66A2RUB6 AP005019.3-201ENST00000620418 560 ntBASIC4.53□□□□□ -1.68
CCDC66A2RUB6 AL357559.1-201ENST00000622228 274 ntBASIC4.53□□□□□ -1.68
CCDC66A2RUB6 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms