Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AC013412.1-201ENST00000610687 192 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 AL355810.1-201ENST00000614629 552 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 AL357080.1-201ENST00000617394 239 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 AL031667.3-201ENST00000620124 655 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 AC131159.1-201ENST00000621854 213 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 AC095031.1-201ENST00000623685 672 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 AC243829.7-201ENST00000633081 225 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 GABRG2-229ENST00000641017 3628 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 AC004925.1-201ENST00000624256 2706 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 AL356473.1-201ENST00000406203 1408 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 Y_RNA.302-201ENST00000364997 102 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 RNA5SP88-201ENST00000365560 109 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 CCNG1P1-201ENST00000406783 885 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 RPS3AP24-201ENST00000407896 734 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 RPLP0P7-201ENST00000416050 667 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 RPL32P28-201ENST00000443577 397 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 ART2BP-201ENST00000453501 499 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 USP9YP10-201ENST00000454868 628 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 OR6K1P-201ENST00000456766 971 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 RPS26P21-201ENST00000475397 348 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 AC068587.2-201ENST00000478386 781 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 RN7SL297P-201ENST00000483161 293 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 AC098799.2-201ENST00000509466 868 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 RNU6-528P-201ENST00000516926 100 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 AC026407.1-201ENST00000518369 204 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 AC018630.1-201ENST00000541376 925 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 AC128657.1-201ENST00000549459 145 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 MED28P6-201ENST00000558776 231 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 AC136618.2-201ENST00000575091 400 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 MIR544B-201ENST00000582372 78 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 AC068313.1-201ENST00000604028 1008 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 AC090186.1-201ENST00000605991 572 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 AC107214.2-201ENST00000608204 634 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 AL391813.2-201ENST00000609113 322 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 AL450472.3-201ENST00000615578 367 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 AL360181.4-201ENST00000621752 134 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 AL356266.1-201ENST00000623311 483 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 AC079597.1-201ENST00000624306 508 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 AC019226.2-201ENST00000625973 424 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 AC006378.2-201ENST00000623178 2476 ntBASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
TRAV40A0A0B4J280 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 RNU6-853P-201ENST00000364306 107 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 DEFB109C-201ENST00000382575 264 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 DEFB109B-201ENST00000382656 264 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 RNU6-1181P-201ENST00000384191 106 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 RNU6-114P-201ENST00000384704 105 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 AL356421.1-201ENST00000403255 413 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 MTCO3P12-201ENST00000416718 547 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 USP9YP26-201ENST00000421008 661 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 AL445567.1-201ENST00000439121 144 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 TRIM60P18-201ENST00000441518 828 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 OR6K5P-201ENST00000447050 945 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 EPS15P1-201ENST00000448836 336 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 ATG12P2-201ENST00000456830 416 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 AC092754.2-201ENST00000463506 460 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 RN7SKP282-201ENST00000516824 299 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 SNORA31.22-201ENST00000517204 135 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms