Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 FAM133CP-201ENST00000332869 704 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 OR1L1-202ENST00000373686 1083 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 SNORD23.1-201ENST00000408212 104 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 RNA5SP80-201ENST00000410475 111 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 VN1R51P-201ENST00000411675 945 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 AL135786.1-201ENST00000415892 214 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 ZNF90P2-204ENST00000419323 1075 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 RAC1P8-201ENST00000427086 527 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 Z93242.1-201ENST00000427102 353 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 RPL32P28-201ENST00000443577 397 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 MTCO1P48-201ENST00000448024 1096 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 USP9YP34-201ENST00000453983 808 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 AC097493.1-201ENST00000463958 372 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 MTND4LP3-201ENST00000468320 276 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 RPL23AP41-201ENST00000484754 458 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 AC147055.4-201ENST00000504399 745 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 RN7SKP31-201ENST00000516354 278 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 RNA5SP281-201ENST00000516504 135 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 RNU6-885P-201ENST00000516607 104 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 SNORA31.22-201ENST00000517204 135 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 SCARNA11.3-201ENST00000517276 130 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 AC022634.1-201ENST00000520765 532 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 AP000916.1-201ENST00000533869 835 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 AC234778.2-201ENST00000566241 354 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 OR4K8P-201ENST00000578842 1048 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 KATNBL1P1-201ENST00000605192 748 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 AC025594.3-201ENST00000613068 790 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 AL162373.1-201ENST00000620433 407 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 AC073308.1-201ENST00000623696 305 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 AL512506.2-201ENST00000624472 458 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 AC026634.1-201ENST00000634369 198 ntBASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
TRAV1-1A0A0B4J248 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 MIR449A-201ENST00000362113 91 ntBASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 RNU6-883P-201ENST00000384597 107 ntBASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 MIR17-201ENST00000385012 84 ntBASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 AL035405.1-201ENST00000400795 710 ntBASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 RSL24D1P4-201ENST00000400938 484 ntBASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 RPS3AP24-201ENST00000407896 734 ntBASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 AL592310.1-201ENST00000414330 671 ntBASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 SEPT2P1-201ENST00000419651 180 ntBASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 AC007560.1-201ENST00000426912 237 ntBASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 AL356867.1-201ENST00000429623 299 ntBASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 MTND4LP7-201ENST00000431728 294 ntBASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 AL512844.2-201ENST00000433990 593 ntBASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 TPT1P14-201ENST00000448018 505 ntBASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 PSPHP1-201ENST00000450062 261 ntBASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 AL353691.1-201ENST00000451332 387 ntBASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 PPP1R2P5-201ENST00000457256 603 ntBASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 HSPE1P6-201ENST00000479457 291 ntBASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 AC034222.1-201ENST00000494052 532 ntBASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 RPL23AP94-201ENST00000512518 302 ntBASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 SNORA48.10-201ENST00000516965 160 ntBASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 AP001317.1-201ENST00000531194 960 ntBASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 AGGF1P5-201ENST00000567900 919 ntBASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 LARP7P2-201ENST00000575306 125 ntBASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 MIR4672-201ENST00000583126 81 ntBASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 AC008749.1-201ENST00000597650 306 ntBASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 AL022067.1-201ENST00000602426 454 ntBASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 AL096840.1-201ENST00000603287 93 ntBASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 AL592148.2-201ENST00000612210 372 ntBASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 OR1S1-201ENST00000624470 978 ntBASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 AC080188.3-201ENST00000624842 748 ntBASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
TRAV1-1A0A0B4J248 CCT4P2-201ENST00000233836 1548 ntBASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 RNU4-82P-201ENST00000362443 140 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms