Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 CBX3P1-201ENST00000325243 554 ntBASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 Y_RNA.72-201ENST00000362894 103 ntBASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 RN7SKP44-201ENST00000363602 316 ntBASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 SNORA24.1-201ENST00000384401 135 ntBASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 SNORA11.1-201ENST00000408133 129 ntBASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 AC114491.1-201ENST00000416095 246 ntBASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 AC068533.1-201ENST00000418542 415 ntBASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 MTCYBP8-201ENST00000422855 651 ntBASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 CALM2P2-201ENST00000428512 440 ntBASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 USP9YP7-201ENST00000436723 430 ntBASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 RPL26P6-201ENST00000440913 438 ntBASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 USP9YP32-201ENST00000452432 430 ntBASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 AL645939.1-201ENST00000453429 797 ntBASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 RPS29P15-201ENST00000458329 171 ntBASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 AC025445.1-201ENST00000502728 300 ntBASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 HMGB1P22-201ENST00000505315 124 ntBASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 RN7SKP219-201ENST00000516825 296 ntBASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 MYL12AP1-201ENST00000518490 515 ntBASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 AC109635.4-202ENST00000531666 412 ntBASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 AC024619.4-201ENST00000580924 316 ntBASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 UBE2V2P2-201ENST00000587677 504 ntBASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 AP001029.3-201ENST00000588063 596 ntBASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 BDH2P1-201ENST00000602288 736 ntBASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 AC233309.1-201ENST00000619522 751 ntBASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 AL589994.2-201ENST00000621124 579 ntBASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 AL360181.4-201ENST00000621752 134 ntBASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 MTND4P14-201ENST00000435799 1354 ntBASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 PNPT1P2-201ENST00000456768 2050 ntBASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHB1Q9Y5F3 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 AL139276.1-201ENST00000311910 1001 ntBASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 SNORD115-7-201ENST00000365306 82 ntBASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 RNU6-1029P-201ENST00000384109 107 ntBASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 SNORD37.1-201ENST00000390968 65 ntBASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 RNU6-903P-201ENST00000391270 109 ntBASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 NDUFS5P1-201ENST00000405668 289 ntBASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 RPL23AP48-201ENST00000406913 488 ntBASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 AC008850.1-201ENST00000427546 362 ntBASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 AL445584.1-201ENST00000431451 330 ntBASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 AC007389.2-201ENST00000434630 306 ntBASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 AP000852.1-201ENST00000472460 573 ntBASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 AF213884.1-201ENST00000488102 463 ntBASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 AL138976.2-201ENST00000563989 694 ntBASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 AC022655.2-201ENST00000577280 318 ntBASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 AC010338.1-201ENST00000621823 717 ntBASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 AC039056.2-201ENST00000622261 511 ntBASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 AP003400.5-201ENST00000624827 617 ntBASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 AL157700.1-201ENST00000561973 1432 ntBASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 API5P2-201ENST00000397055 1498 ntBASIC4.11□□□□□ -1.75
PCDHB1Q9Y5F3 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms