Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC098657.3-201ENST00000620434 263 ntBASIC2.01□□□□□ -2.09
SHANK2Q9UPX8 AP003122.6-201ENST00000623831 495 ntBASIC2.01□□□□□ -2.09
SHANK2Q9UPX8 AL356118.1-201ENST00000635272 1078 ntBASIC2.01□□□□□ -2.09
SHANK2Q9UPX8 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.01□□□□□ -2.09
SHANK2Q9UPX8 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SHANK2Q9UPX8 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.01□□□□□ -2.09
SHANK2Q9UPX8 SNORD121B-201ENST00000458838 81 ntBASIC2.01□□□□□ -2.09
SHANK2Q9UPX8 RNU6-711P-201ENST00000517255 106 ntBASIC2.01□□□□□ -2.09
SHANK2Q9UPX8 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.01□□□□□ -2.09
SHANK2Q9UPX8 AC068338.1-201ENST00000565567 176 ntBASIC2.01□□□□□ -2.09
SHANK2Q9UPX8 AC016727.2-201ENST00000603988 621 ntBASIC2.01□□□□□ -2.09
SHANK2Q9UPX8 AC013553.2-201ENST00000604244 589 ntBASIC2.01□□□□□ -2.09
SHANK2Q9UPX8 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2□□□□□ -2.09
SHANK2Q9UPX8 AL359851.1-201ENST00000569460 4997 ntBASIC2□□□□□ -2.09
SHANK2Q9UPX8 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2□□□□□ -2.09
SHANK2Q9UPX8 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
SHANK2Q9UPX8 RNU6-600P-201ENST00000362524 99 ntBASIC2□□□□□ -2.09
SHANK2Q9UPX8 IPO7P1-201ENST00000442031 636 ntBASIC2□□□□□ -2.09
SHANK2Q9UPX8 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2□□□□□ -2.09
SHANK2Q9UPX8 RPS23P3-201ENST00000470993 430 ntBASIC2□□□□□ -2.09
SHANK2Q9UPX8 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2□□□□□ -2.09
SHANK2Q9UPX8 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
SHANK2Q9UPX8 NPM1P52-201ENST00000518264 846 ntBASIC2□□□□□ -2.09
SHANK2Q9UPX8 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2□□□□□ -2.09
SHANK2Q9UPX8 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2□□□□□ -2.09
SHANK2Q9UPX8 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2□□□□□ -2.09
SHANK2Q9UPX8 MIR98-201ENST00000606724 119 ntBASIC2□□□□□ -2.09
SHANK2Q9UPX8 AL136520.1-201ENST00000600311 1322 ntBASIC2□□□□□ -2.09
SHANK2Q9UPX8 AP002907.1-201ENST00000606361 1430 ntBASIC2□□□□□ -2.09
SHANK2Q9UPX8 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
SHANK2Q9UPX8 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
SHANK2Q9UPX8 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SHANK2Q9UPX8 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SHANK2Q9UPX8 RNU1-139P-201ENST00000391307 165 ntBASIC1.99□□□□□ -2.09
SHANK2Q9UPX8 MTCYBP12-201ENST00000440559 1134 ntBASIC1.99□□□□□ -2.09
SHANK2Q9UPX8 RPL23AP33-201ENST00000442301 452 ntBASIC1.99□□□□□ -2.09
SHANK2Q9UPX8 AL136380.1-201ENST00000447970 162 ntBASIC1.99□□□□□ -2.09
SHANK2Q9UPX8 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.99□□□□□ -2.09
SHANK2Q9UPX8 AL583843.1-201ENST00000456070 346 ntBASIC1.99□□□□□ -2.09
SHANK2Q9UPX8 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.99□□□□□ -2.09
SHANK2Q9UPX8 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.99□□□□□ -2.09
SHANK2Q9UPX8 MTCO1P47-201ENST00000523889 1271 ntBASIC1.99□□□□□ -2.09
SHANK2Q9UPX8 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.99□□□□□ -2.09
SHANK2Q9UPX8 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SHANK2Q9UPX8 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SHANK2Q9UPX8 ZNF734P-201ENST00000419494 1534 ntBASIC1.98□□□□□ -2.09
SHANK2Q9UPX8 RNU4-65P-201ENST00000410473 140 ntBASIC1.98□□□□□ -2.09
SHANK2Q9UPX8 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.98□□□□□ -2.09
SHANK2Q9UPX8 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.98□□□□□ -2.09
SHANK2Q9UPX8 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.98□□□□□ -2.09
SHANK2Q9UPX8 AC087854.1-201ENST00000519706 414 ntBASIC1.98□□□□□ -2.09
SHANK2Q9UPX8 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.98□□□□□ -2.09
SHANK2Q9UPX8 HSPE1P3-201ENST00000559254 309 ntBASIC1.98□□□□□ -2.09
SHANK2Q9UPX8 AL138976.2-201ENST00000563989 694 ntBASIC1.98□□□□□ -2.09
SHANK2Q9UPX8 AC007229.1-201ENST00000590455 412 ntBASIC1.98□□□□□ -2.09
SHANK2Q9UPX8 AC245128.3-201ENST00000594721 748 ntBASIC1.98□□□□□ -2.09
SHANK2Q9UPX8 AL031274.2-201ENST00000599419 203 ntBASIC1.98□□□□□ -2.09
SHANK2Q9UPX8 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC1.98□□□□□ -2.09
SHANK2Q9UPX8 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
SHANK2Q9UPX8 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.97□□□□□ -2.09
SHANK2Q9UPX8 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SHANK2Q9UPX8 SNORA51.12-201ENST00000384448 134 ntBASIC1.97□□□□□ -2.09
SHANK2Q9UPX8 MT-TP-201ENST00000387461 68 ntBASIC1.97□□□□□ -2.09
SHANK2Q9UPX8 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SHANK2Q9UPX8 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.97□□□□□ -2.09
SHANK2Q9UPX8 AC007098.1-201ENST00000420122 367 ntBASIC1.97□□□□□ -2.09
SHANK2Q9UPX8 UBE2V1P13-201ENST00000436983 439 ntBASIC1.97□□□□□ -2.09
SHANK2Q9UPX8 ARL5AP2-201ENST00000444698 533 ntBASIC1.97□□□□□ -2.09
SHANK2Q9UPX8 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.97□□□□□ -2.09
SHANK2Q9UPX8 RPS27P21-201ENST00000486977 252 ntBASIC1.97□□□□□ -2.09
SHANK2Q9UPX8 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.97□□□□□ -2.09
SHANK2Q9UPX8 AC245036.5-201ENST00000596330 847 ntBASIC1.97□□□□□ -2.09
SHANK2Q9UPX8 AC009220.3-201ENST00000604318 586 ntBASIC1.97□□□□□ -2.09
SHANK2Q9UPX8 AL390240.1-201ENST00000612950 384 ntBASIC1.97□□□□□ -2.09
SHANK2Q9UPX8 AC139769.3-201ENST00000618383 175 ntBASIC1.97□□□□□ -2.09
SHANK2Q9UPX8 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.97□□□□□ -2.09
SHANK2Q9UPX8 Y_RNA.251-201ENST00000364551 99 ntBASIC1.96□□□□□ -2.1
SHANK2Q9UPX8 RNU6-234P-201ENST00000365229 104 ntBASIC1.96□□□□□ -2.1
SHANK2Q9UPX8 AC092447.6-201ENST00000414578 210 ntBASIC1.96□□□□□ -2.1
SHANK2Q9UPX8 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.96□□□□□ -2.1
SHANK2Q9UPX8 IFNA20P-201ENST00000436840 528 ntBASIC1.96□□□□□ -2.1
SHANK2Q9UPX8 RPS26P56-201ENST00000444468 240 ntBASIC1.96□□□□□ -2.1
SHANK2Q9UPX8 AC005297.2-201ENST00000450430 606 ntBASIC1.96□□□□□ -2.1
SHANK2Q9UPX8 HMGN2P18-201ENST00000450680 270 ntBASIC1.96□□□□□ -2.1
SHANK2Q9UPX8 NCOR1P1-202ENST00000486162 291 ntBASIC1.96□□□□□ -2.1
SHANK2Q9UPX8 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.96□□□□□ -2.1
SHANK2Q9UPX8 AC068700.1-201ENST00000565862 3754 ntBASIC1.96□□□□□ -2.1
SHANK2Q9UPX8 RNU6-37P-201ENST00000362692 107 ntBASIC1.95□□□□□ -2.1
SHANK2Q9UPX8 RNU6-11P-201ENST00000364234 107 ntBASIC1.95□□□□□ -2.1
SHANK2Q9UPX8 Y_RNA.433-201ENST00000384089 102 ntBASIC1.95□□□□□ -2.1
SHANK2Q9UPX8 RPS12P24-201ENST00000412619 387 ntBASIC1.95□□□□□ -2.1
SHANK2Q9UPX8 SNRPGP13-201ENST00000442212 177 ntBASIC1.95□□□□□ -2.1
SHANK2Q9UPX8 AL078601.1-201ENST00000444542 271 ntBASIC1.95□□□□□ -2.1
SHANK2Q9UPX8 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.95□□□□□ -2.1
SHANK2Q9UPX8 Y_RNA.681-201ENST00000516445 113 ntBASIC1.95□□□□□ -2.1
SHANK2Q9UPX8 AP000907.2-201ENST00000530827 353 ntBASIC1.95□□□□□ -2.1
SHANK2Q9UPX8 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.95□□□□□ -2.1
SHANK2Q9UPX8 AC090616.5-202ENST00000582111 297 ntBASIC1.95□□□□□ -2.1
SHANK2Q9UPX8 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC1.95□□□□□ -2.1
SHANK2Q9UPX8 AC096656.1-201ENST00000623826 1364 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms