Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 AL049839.1-201ENST00000556151 657 ntBASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 MIR4700-201ENST00000578311 74 ntBASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 AP005403.1-201ENST00000579720 229 ntBASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 AC064801.1-201ENST00000612025 407 ntBASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 Z73965.1-201ENST00000623412 2297 ntBASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 SNORA20.1-201ENST00000364790 130 ntBASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 MTCYBP2-201ENST00000407745 171 ntBASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 Y_RNA.592-201ENST00000410274 109 ntBASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 RNU2-38P-201ENST00000410856 79 ntBASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 AC079809.1-201ENST00000415468 276 ntBASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 AL159987.2-201ENST00000432754 307 ntBASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 AL389915.2-201ENST00000454576 441 ntBASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 CEACAMP4-201ENST00000457676 421 ntBASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 AC010285.1-201ENST00000470580 392 ntBASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 RPL23AP45-201ENST00000476406 468 ntBASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 RN7SL826P-201ENST00000479724 288 ntBASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 RNU6-1256P-201ENST00000516539 103 ntBASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 SCARNA20.4-201ENST00000516969 131 ntBASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 RNA5SP290-201ENST00000517133 127 ntBASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 RNU6-897P-201ENST00000517135 105 ntBASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 AP006245.2-201ENST00000522004 300 ntBASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 AL359219.2-201ENST00000555184 348 ntBASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 MED28P6-201ENST00000558776 231 ntBASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 MIR4646-201ENST00000580775 63 ntBASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 MIR3128-201ENST00000581957 66 ntBASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 MIR7853-201ENST00000584820 132 ntBASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 AP000769.2-201ENST00000602344 396 ntBASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 AC010632.3-201ENST00000611377 369 ntBASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 AL359693.1-201ENST00000614959 2407 ntBASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
FOXD3Q9UJU5 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 Y_RNA.64-201ENST00000362845 102 ntBASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 RNU1-76P-201ENST00000362903 159 ntBASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 U8.4-201ENST00000363626 134 ntBASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 RN7SKP227-201ENST00000364445 330 ntBASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 RNU6-741P-201ENST00000383889 107 ntBASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 Y_RNA.471-201ENST00000384312 102 ntBASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 SNORA16A-201ENST00000384342 137 ntBASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 MIR34A-201ENST00000385130 110 ntBASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 HSPA8P15-201ENST00000401676 786 ntBASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 RNU2-33P-201ENST00000410344 192 ntBASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 SRSF1P1-201ENST00000424058 520 ntBASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 RPL27AP8-201ENST00000424277 446 ntBASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 AL132765.1-201ENST00000434165 553 ntBASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 RPS24P6-201ENST00000452670 400 ntBASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 AC013470.1-201ENST00000453438 462 ntBASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 SNORD108-201ENST00000459332 71 ntBASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 AC104164.2-201ENST00000496953 495 ntBASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 HMGB1P22-201ENST00000505315 124 ntBASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 AC025465.3-201ENST00000510570 311 ntBASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 AC008958.1-201ENST00000511047 682 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms