Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC022634.1-201ENST00000520765 532 ntBASIC1.7□□□□□ -2.14
SCN11AQ9UI33 CENPUP2-201ENST00000555897 1186 ntBASIC1.7□□□□□ -2.14
SCN11AQ9UI33 AC068338.1-201ENST00000565567 176 ntBASIC1.7□□□□□ -2.14
SCN11AQ9UI33 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.7□□□□□ -2.14
SCN11AQ9UI33 AC008962.1-201ENST00000605729 304 ntBASIC1.7□□□□□ -2.14
SCN11AQ9UI33 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.7□□□□□ -2.14
SCN11AQ9UI33 MIR6078-201ENST00000611069 100 ntBASIC1.7□□□□□ -2.14
SCN11AQ9UI33 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SCN11AQ9UI33 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
SCN11AQ9UI33 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SCN11AQ9UI33 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SCN11AQ9UI33 AL138880.1-201ENST00000405824 642 ntBASIC1.7□□□□□ -2.14
SCN11AQ9UI33 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.7□□□□□ -2.14
SCN11AQ9UI33 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.7□□□□□ -2.14
SCN11AQ9UI33 NAP1L4P3-201ENST00000432820 1147 ntBASIC1.7□□□□□ -2.14
SCN11AQ9UI33 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SCN11AQ9UI33 UBE2FP3-201ENST00000436366 524 ntBASIC1.7□□□□□ -2.14
SCN11AQ9UI33 IPO7P1-201ENST00000442031 636 ntBASIC1.7□□□□□ -2.14
SCN11AQ9UI33 MTND3P6-201ENST00000485242 339 ntBASIC1.7□□□□□ -2.14
SCN11AQ9UI33 MTND3P24-201ENST00000506306 329 ntBASIC1.7□□□□□ -2.14
SCN11AQ9UI33 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.7□□□□□ -2.14
SCN11AQ9UI33 AC002487.1-201ENST00000604565 994 ntBASIC1.7□□□□□ -2.14
SCN11AQ9UI33 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.7□□□□□ -2.14
SCN11AQ9UI33 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.7□□□□□ -2.14
SCN11AQ9UI33 AL356118.1-201ENST00000635272 1078 ntBASIC1.7□□□□□ -2.14
SCN11AQ9UI33 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
SCN11AQ9UI33 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
SCN11AQ9UI33 RNU6-1032P-201ENST00000384100 107 ntBASIC1.69□□□□□ -2.14
SCN11AQ9UI33 RNU6-1072P-201ENST00000384703 107 ntBASIC1.69□□□□□ -2.14
SCN11AQ9UI33 RNU6-443P-201ENST00000384780 107 ntBASIC1.69□□□□□ -2.14
SCN11AQ9UI33 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.69□□□□□ -2.14
SCN11AQ9UI33 AL136380.1-201ENST00000447970 162 ntBASIC1.69□□□□□ -2.14
SCN11AQ9UI33 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.69□□□□□ -2.14
SCN11AQ9UI33 AC109446.2-201ENST00000567872 497 ntBASIC1.69□□□□□ -2.14
SCN11AQ9UI33 FAM106CP-201ENST00000582212 507 ntBASIC1.69□□□□□ -2.14
SCN11AQ9UI33 AC008121.3-201ENST00000618726 433 ntBASIC1.69□□□□□ -2.14
SCN11AQ9UI33 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.69□□□□□ -2.14
SCN11AQ9UI33 MKKS-204ENST00000639674 192 ntBASIC1.69□□□□□ -2.14
SCN11AQ9UI33 AC099654.7-201ENST00000635788 2127 ntBASIC1.69□□□□□ -2.14
SCN11AQ9UI33 SNORD114-27-201ENST00000363766 70 ntBASIC1.68□□□□□ -2.14
SCN11AQ9UI33 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.68□□□□□ -2.14
SCN11AQ9UI33 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.68□□□□□ -2.14
SCN11AQ9UI33 AC092902.1-201ENST00000486999 259 ntBASIC1.68□□□□□ -2.14
SCN11AQ9UI33 AC022690.1-201ENST00000526681 550 ntBASIC1.68□□□□□ -2.14
SCN11AQ9UI33 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.68□□□□□ -2.14
SCN11AQ9UI33 AC097504.2-201ENST00000608088 454 ntBASIC1.68□□□□□ -2.14
SCN11AQ9UI33 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.68□□□□□ -2.14
SCN11AQ9UI33 AC098657.3-201ENST00000620434 263 ntBASIC1.68□□□□□ -2.14
SCN11AQ9UI33 AC025048.6-202ENST00000627667 438 ntBASIC1.68□□□□□ -2.14
SCN11AQ9UI33 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SCN11AQ9UI33 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SCN11AQ9UI33 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SCN11AQ9UI33 RNU4-41P-201ENST00000364426 143 ntBASIC1.67□□□□□ -2.14
SCN11AQ9UI33 RPL37P6-202ENST00000464216 403 ntBASIC1.67□□□□□ -2.14
SCN11AQ9UI33 RPS27P21-201ENST00000486977 252 ntBASIC1.67□□□□□ -2.14
SCN11AQ9UI33 AC114322.1-201ENST00000506771 926 ntBASIC1.67□□□□□ -2.14
SCN11AQ9UI33 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.67□□□□□ -2.14
SCN11AQ9UI33 AC090821.2-201ENST00000523552 176 ntBASIC1.67□□□□□ -2.14
SCN11AQ9UI33 RPL21P5-201ENST00000554662 472 ntBASIC1.67□□□□□ -2.14
SCN11AQ9UI33 MIR3122-201ENST00000577243 73 ntBASIC1.67□□□□□ -2.14
SCN11AQ9UI33 AC090897.2-201ENST00000581715 130 ntBASIC1.67□□□□□ -2.14
SCN11AQ9UI33 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.67□□□□□ -2.14
SCN11AQ9UI33 AC009090.3-201ENST00000616553 565 ntBASIC1.67□□□□□ -2.14
SCN11AQ9UI33 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.67□□□□□ -2.14
SCN11AQ9UI33 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.67□□□□□ -2.14
SCN11AQ9UI33 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.67□□□□□ -2.14
SCN11AQ9UI33 RNU6-1080P-201ENST00000383982 107 ntBASIC1.67□□□□□ -2.14
SCN11AQ9UI33 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.67□□□□□ -2.14
SCN11AQ9UI33 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.67□□□□□ -2.14
SCN11AQ9UI33 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.67□□□□□ -2.14
SCN11AQ9UI33 AC074117.2-201ENST00000417130 397 ntBASIC1.67□□□□□ -2.14
SCN11AQ9UI33 AC007098.1-201ENST00000420122 367 ntBASIC1.67□□□□□ -2.14
SCN11AQ9UI33 NCOR1P1-202ENST00000486162 291 ntBASIC1.67□□□□□ -2.14
SCN11AQ9UI33 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC1.67□□□□□ -2.14
SCN11AQ9UI33 CBX3P2-202ENST00000583365 535 ntBASIC1.67□□□□□ -2.14
SCN11AQ9UI33 AC091895.1-201ENST00000624494 256 ntBASIC1.67□□□□□ -2.14
SCN11AQ9UI33 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SCN11AQ9UI33 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.66□□□□□ -2.14
SCN11AQ9UI33 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.66□□□□□ -2.14
SCN11AQ9UI33 RNU6-50P-201ENST00000362356 103 ntBASIC1.66□□□□□ -2.14
SCN11AQ9UI33 SNORA40.6-201ENST00000391153 128 ntBASIC1.66□□□□□ -2.14
SCN11AQ9UI33 AC233728.2-201ENST00000425348 757 ntBASIC1.66□□□□□ -2.14
SCN11AQ9UI33 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.66□□□□□ -2.14
SCN11AQ9UI33 MTND4LP16-201ENST00000440828 295 ntBASIC1.66□□□□□ -2.14
SCN11AQ9UI33 AC109635.4-202ENST00000531666 412 ntBASIC1.66□□□□□ -2.14
SCN11AQ9UI33 CYCSP26-201ENST00000534107 320 ntBASIC1.66□□□□□ -2.14
SCN11AQ9UI33 FAM106DP-201ENST00000586416 501 ntBASIC1.66□□□□□ -2.14
SCN11AQ9UI33 AP000648.3-201ENST00000623539 4507 ntBASIC1.66□□□□□ -2.14
SCN11AQ9UI33 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.14
SCN11AQ9UI33 RNU6-234P-201ENST00000365229 104 ntBASIC1.65□□□□□ -2.14
SCN11AQ9UI33 SNORD23.1-201ENST00000408212 104 ntBASIC1.65□□□□□ -2.14
SCN11AQ9UI33 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.65□□□□□ -2.14
SCN11AQ9UI33 RPS6P15-201ENST00000431996 751 ntBASIC1.65□□□□□ -2.14
SCN11AQ9UI33 CALM1P1-201ENST00000442082 433 ntBASIC1.65□□□□□ -2.14
SCN11AQ9UI33 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.65□□□□□ -2.14
SCN11AQ9UI33 AL031183.1-201ENST00000457667 207 ntBASIC1.65□□□□□ -2.14
SCN11AQ9UI33 MTCO3P35-201ENST00000485582 781 ntBASIC1.65□□□□□ -2.14
SCN11AQ9UI33 RPL30P11-201ENST00000495304 339 ntBASIC1.65□□□□□ -2.14
SCN11AQ9UI33 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
SCN11AQ9UI33 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.65□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms