Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 RNY3P13-201ENST00000365542 102 ntBASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 RNU6ATAC-201ENST00000408749 126 ntBASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 SPA17P1-201ENST00000416656 452 ntBASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 AC007389.2-201ENST00000434630 306 ntBASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 RPS12P18-201ENST00000442381 270 ntBASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 AP000936.2-201ENST00000447151 681 ntBASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 ST13P20-201ENST00000447996 1065 ntBASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 RNA5SP310-201ENST00000459084 116 ntBASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 PHBP14-201ENST00000512887 367 ntBASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 RNU6-390P-201ENST00000516259 103 ntBASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 TRMT10BP1-201ENST00000519377 943 ntBASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 AC100870.1-201ENST00000522035 505 ntBASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 AC022690.1-201ENST00000526681 550 ntBASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 RPL21P12-201ENST00000559810 515 ntBASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 MIR4293-201ENST00000584305 78 ntBASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 MIR4276-201ENST00000584832 70 ntBASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 AC073544.2-201ENST00000601155 540 ntBASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 AC009570.1-201ENST00000609599 745 ntBASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 MIR6798-201ENST00000612887 67 ntBASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 MIR8058-201ENST00000615737 89 ntBASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 SNHG22-203ENST00000617833 660 ntBASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 AL034408.1-202ENST00000636088 415 ntBASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 AC118273.1-201ENST00000525324 3006 ntBASIC3.52□□□□□ -1.85
LIMA1Q9UHB6 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 AL049781.1-201ENST00000623195 3585 ntBASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 AC005183.1-201ENST00000603687 1979 ntBASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 SNORA46-201ENST00000384762 135 ntBASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 MIR218-2-201ENST00000385006 110 ntBASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 SNORA40.3-201ENST00000390964 122 ntBASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 BX323014.1-201ENST00000412876 237 ntBASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 USP12PX-201ENST00000432383 1057 ntBASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 PGBD4P3-201ENST00000440731 581 ntBASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 RPS20P20-201ENST00000460498 340 ntBASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 AC010631.1-201ENST00000474150 156 ntBASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 RPS27AP1-201ENST00000475545 471 ntBASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 AC082651.2-201ENST00000496833 166 ntBASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 RNU6-1256P-201ENST00000516539 103 ntBASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 AC093331.1-201ENST00000521474 169 ntBASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 CKS1BP3-201ENST00000600888 237 ntBASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 AL162713.1-201ENST00000604480 262 ntBASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 AC008277.2-201ENST00000605196 797 ntBASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 AC107294.3-201ENST00000609211 526 ntBASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 AC008250.2-201ENST00000615261 205 ntBASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 AC039056.2-201ENST00000622261 511 ntBASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
LIMA1Q9UHB6 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
LIMA1Q9UHB6 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LIMA1Q9UHB6 MIR554-201ENST00000384874 96 ntBASIC3.5□□□□□ -1.85
LIMA1Q9UHB6 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
LIMA1Q9UHB6 RNU6-1197P-201ENST00000391183 107 ntBASIC3.5□□□□□ -1.85
LIMA1Q9UHB6 AL359634.1-202ENST00000404721 284 ntBASIC3.5□□□□□ -1.85
LIMA1Q9UHB6 RNU2-62P-201ENST00000410868 191 ntBASIC3.5□□□□□ -1.85
LIMA1Q9UHB6 RN7SKP140-201ENST00000411196 284 ntBASIC3.5□□□□□ -1.85
LIMA1Q9UHB6 RPS3AP3-201ENST00000411933 242 ntBASIC3.5□□□□□ -1.85
LIMA1Q9UHB6 AC016907.1-201ENST00000419483 435 ntBASIC3.5□□□□□ -1.85
LIMA1Q9UHB6 RPS15AP12-201ENST00000419498 388 ntBASIC3.5□□□□□ -1.85
LIMA1Q9UHB6 AC019097.1-201ENST00000424783 735 ntBASIC3.5□□□□□ -1.85
LIMA1Q9UHB6 AL590383.1-201ENST00000428602 75 ntBASIC3.5□□□□□ -1.85
LIMA1Q9UHB6 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.5□□□□□ -1.85
LIMA1Q9UHB6 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.5□□□□□ -1.85
LIMA1Q9UHB6 AL022238.1-201ENST00000442557 355 ntBASIC3.5□□□□□ -1.85
LIMA1Q9UHB6 MTND6P13-201ENST00000443510 523 ntBASIC3.5□□□□□ -1.85
LIMA1Q9UHB6 AC140076.1-201ENST00000449897 361 ntBASIC3.5□□□□□ -1.85
LIMA1Q9UHB6 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LIMA1Q9UHB6 ELOCP23-201ENST00000452014 332 ntBASIC3.5□□□□□ -1.85
LIMA1Q9UHB6 MTND1P12-201ENST00000455231 147 ntBASIC3.5□□□□□ -1.85
LIMA1Q9UHB6 RNU6-956P-201ENST00000458868 103 ntBASIC3.5□□□□□ -1.85
LIMA1Q9UHB6 RN7SL75P-201ENST00000461926 281 ntBASIC3.5□□□□□ -1.85
LIMA1Q9UHB6 MTND1P3-201ENST00000484956 952 ntBASIC3.5□□□□□ -1.85
LIMA1Q9UHB6 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.5□□□□□ -1.85
LIMA1Q9UHB6 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.5□□□□□ -1.85
LIMA1Q9UHB6 AC114797.1-201ENST00000514003 728 ntBASIC3.5□□□□□ -1.85
LIMA1Q9UHB6 Y_RNA.672-201ENST00000516289 104 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 153.4 ms