Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MTCO1P5-201ENST00000433573 344 ntBASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 AL162389.1-201ENST00000449233 177 ntBASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 AC010655.1-201ENST00000449336 292 ntBASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 RPL21P41-201ENST00000459863 264 ntBASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 RN7SL184P-201ENST00000488308 297 ntBASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 AC010469.2-201ENST00000496412 480 ntBASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 AC109479.2-201ENST00000517842 174 ntBASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 AL049872.1-201ENST00000556323 322 ntBASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 AC005951.2-201ENST00000576282 495 ntBASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 AL078605.1-201ENST00000603529 500 ntBASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 AC024940.4-201ENST00000605507 246 ntBASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 MIR6837-201ENST00000620884 64 ntBASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 CU639417.4-201ENST00000623928 207 ntBASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 CYP4F35P-202ENST00000636121 390 ntBASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 AP001148.1-201ENST00000624124 2359 ntBASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 HAUS6P2-201ENST00000433254 2404 ntBASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 DDX10P1-201ENST00000448545 1933 ntBASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 Y_RNA.143-201ENST00000363520 106 ntBASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 RNA5SP507-201ENST00000363603 121 ntBASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 RNU6-290P-201ENST00000365212 101 ntBASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 Y_RNA.418-201ENST00000384029 102 ntBASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 RNU6-171P-201ENST00000384354 107 ntBASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 AL009179.1-201ENST00000406085 265 ntBASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 U3.39-201ENST00000408569 239 ntBASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 AC244098.2-201ENST00000422068 99 ntBASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 AC093414.1-201ENST00000434712 514 ntBASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 AL450023.1-201ENST00000450868 751 ntBASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 RPL23AP81-201ENST00000455252 467 ntBASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 Z92846.1-201ENST00000456203 268 ntBASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 AC133134.1-201ENST00000466800 359 ntBASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 AC010631.1-201ENST00000474150 156 ntBASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 RN7SL583P-201ENST00000475692 287 ntBASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 HMGN2P13-201ENST00000476476 274 ntBASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 TRAV32-201ENST00000553993 340 ntBASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 AC098826.3-201ENST00000603823 466 ntBASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 MIR3976-201ENST00000606807 139 ntBASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 RPSAP73-201ENST00000614820 330 ntBASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 U6.92-201ENST00000636464 89 ntBASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 AC093591.2-201ENST00000565254 3843 ntBASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.37□□□□□ -1.55
CUEDC1Q9NWM3 OR4F13P-202ENST00000560066 2054 ntBASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 SNORD50.1-201ENST00000362987 71 ntBASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 Y_RNA.292-201ENST00000364904 97 ntBASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 RNA5SP187-201ENST00000384400 119 ntBASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 MIR223-201ENST00000385204 110 ntBASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 AC013442.1-201ENST00000397347 228 ntBASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 MTCYBP2-201ENST00000407745 171 ntBASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 RNF10P1-201ENST00000418589 369 ntBASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms