Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 AC008745.1-201ENST00000604064 271 ntBASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 AC113403.1-201ENST00000604910 193 ntBASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 AC012603.1-201ENST00000606424 528 ntBASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 MIR15A-201ENST00000607334 83 ntBASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 AF117829.1-206ENST00000621883 3802 ntBASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 RNU6-552P-201ENST00000362869 119 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 Y_RNA.245-201ENST00000364493 95 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 RNU6-116P-201ENST00000384042 109 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 RNU6-550P-201ENST00000391057 101 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 RNU6-903P-201ENST00000391270 109 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 AP000567.1-201ENST00000406413 156 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 SNORA11F-201ENST00000408237 128 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 RNU2-29P-201ENST00000410423 189 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 RPL7P46-201ENST00000425129 740 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 AL592045.1-201ENST00000429867 352 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 MTND1P2-201ENST00000430604 821 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 AL512844.2-201ENST00000433990 593 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 HSPD1P21-201ENST00000436541 245 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 Z82210.1-201ENST00000440037 231 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 RPS24P13-201ENST00000442520 397 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 H2AFZP6-201ENST00000444403 394 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 NFU1P2-201ENST00000448700 469 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 AC109927.2-201ENST00000506416 303 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 SUMO2P20-201ENST00000520803 283 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 AC022690.1-201ENST00000526681 550 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 AC063950.1-201ENST00000552036 308 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 AL121576.1-201ENST00000556055 276 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 AL133241.1-201ENST00000556832 487 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 BNIP3P9-201ENST00000603714 553 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 AL109618.2-201ENST00000605527 211 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 AC008945.2-201ENST00000606056 604 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 AC107294.1-201ENST00000609524 467 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 AC009570.1-201ENST00000609599 745 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 AC128687.2-201ENST00000609657 566 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 uc_338.11-201ENST00000619132 160 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 AC010338.1-201ENST00000621823 717 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 AC024940.5-201ENST00000622889 474 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 AC027309.3-201ENST00000623419 351 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 AC140479.6-201ENST00000633535 357 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 CUL1P1-201ENST00000509510 2425 ntBASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.49□□□□□ -1.85
LIN7CQ9NUP9 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LIN7CQ9NUP9 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LIN7CQ9NUP9 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.48□□□□□ -1.85
LIN7CQ9NUP9 AL049641.1-201ENST00000441055 1948 ntBASIC3.48□□□□□ -1.85
LIN7CQ9NUP9 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LIN7CQ9NUP9 AC016588.2-201ENST00000632484 3021 ntBASIC3.48□□□□□ -1.85
LIN7CQ9NUP9 RPL7P26-201ENST00000333817 754 ntBASIC3.48□□□□□ -1.85
LIN7CQ9NUP9 RNU6-877P-201ENST00000383868 107 ntBASIC3.48□□□□□ -1.85
LIN7CQ9NUP9 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
LIN7CQ9NUP9 FAT1P1-201ENST00000406588 507 ntBASIC3.48□□□□□ -1.85
LIN7CQ9NUP9 RNU6-1068P-201ENST00000410958 103 ntBASIC3.48□□□□□ -1.85
LIN7CQ9NUP9 RNA5SP306-201ENST00000411087 107 ntBASIC3.48□□□□□ -1.85
LIN7CQ9NUP9 RNA5SP39-201ENST00000411245 120 ntBASIC3.48□□□□□ -1.85
LIN7CQ9NUP9 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.48□□□□□ -1.85
LIN7CQ9NUP9 OR6C66P-201ENST00000414917 930 ntBASIC3.48□□□□□ -1.85
LIN7CQ9NUP9 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.48□□□□□ -1.85
LIN7CQ9NUP9 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.48□□□□□ -1.85
LIN7CQ9NUP9 RPL18P10-201ENST00000425606 538 ntBASIC3.48□□□□□ -1.85
LIN7CQ9NUP9 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.48□□□□□ -1.85
LIN7CQ9NUP9 CALM2P2-201ENST00000428512 440 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms