Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 Y_RNA.500-201ENST00000384466 111 ntBASIC2.32□□□□□ -2.04
TREX1Q9NSU2 SNORA67.4-201ENST00000384688 142 ntBASIC2.32□□□□□ -2.04
TREX1Q9NSU2 AL031679.1-201ENST00000400616 525 ntBASIC2.32□□□□□ -2.04
TREX1Q9NSU2 DHFRP6-201ENST00000401776 268 ntBASIC2.32□□□□□ -2.04
TREX1Q9NSU2 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.32□□□□□ -2.04
TREX1Q9NSU2 AL161449.1-201ENST00000414531 1199 ntBASIC2.32□□□□□ -2.04
TREX1Q9NSU2 AL590383.1-201ENST00000428602 75 ntBASIC2.32□□□□□ -2.04
TREX1Q9NSU2 RPS15AP28-201ENST00000435088 386 ntBASIC2.32□□□□□ -2.04
TREX1Q9NSU2 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.32□□□□□ -2.04
TREX1Q9NSU2 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.32□□□□□ -2.04
TREX1Q9NSU2 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.32□□□□□ -2.04
TREX1Q9NSU2 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.32□□□□□ -2.04
TREX1Q9NSU2 AL109741.2-201ENST00000455561 343 ntBASIC2.32□□□□□ -2.04
TREX1Q9NSU2 MRPL42P6-201ENST00000486397 371 ntBASIC2.32□□□□□ -2.04
TREX1Q9NSU2 AC135721.1-201ENST00000497954 479 ntBASIC2.32□□□□□ -2.04
TREX1Q9NSU2 AC016550.1-201ENST00000505348 785 ntBASIC2.32□□□□□ -2.04
TREX1Q9NSU2 XKRY-201ENST00000510392 1100 ntBASIC2.32□□□□□ -2.04
TREX1Q9NSU2 AC022483.1-201ENST00000514020 567 ntBASIC2.32□□□□□ -2.04
TREX1Q9NSU2 DEFB130C-202ENST00000530001 230 ntBASIC2.32□□□□□ -2.04
TREX1Q9NSU2 GLYCAM1-201ENST00000546596 285 ntBASIC2.32□□□□□ -2.04
TREX1Q9NSU2 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.32□□□□□ -2.04
TREX1Q9NSU2 AC105137.2-201ENST00000569073 466 ntBASIC2.32□□□□□ -2.04
TREX1Q9NSU2 AL356280.1-201ENST00000603614 379 ntBASIC2.32□□□□□ -2.04
TREX1Q9NSU2 AP002802.2-201ENST00000605877 235 ntBASIC2.32□□□□□ -2.04
TREX1Q9NSU2 AC243773.3-201ENST00000613270 256 ntBASIC2.32□□□□□ -2.04
TREX1Q9NSU2 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.32□□□□□ -2.04
TREX1Q9NSU2 AC009159.1-201ENST00000618386 642 ntBASIC2.32□□□□□ -2.04
TREX1Q9NSU2 AC008443.7-201ENST00000622195 246 ntBASIC2.32□□□□□ -2.04
TREX1Q9NSU2 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
TREX1Q9NSU2 AL160394.1-201ENST00000624765 724 ntBASIC2.32□□□□□ -2.04
TREX1Q9NSU2 MIR203B-201ENST00000636080 86 ntBASIC2.32□□□□□ -2.04
TREX1Q9NSU2 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
TREX1Q9NSU2 ZNF271P-202ENST00000465539 1970 ntBASIC2.32□□□□□ -2.04
TREX1Q9NSU2 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.32□□□□□ -2.04
TREX1Q9NSU2 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.31□□□□□ -2.04
TREX1Q9NSU2 AP005901.5-201ENST00000545779 1796 ntBASIC2.31□□□□□ -2.04
TREX1Q9NSU2 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
TREX1Q9NSU2 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
TREX1Q9NSU2 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
TREX1Q9NSU2 RNU6-28P-201ENST00000362378 107 ntBASIC2.31□□□□□ -2.04
TREX1Q9NSU2 SNORA38-201ENST00000363946 132 ntBASIC2.31□□□□□ -2.04
TREX1Q9NSU2 RNU6-1072P-201ENST00000384703 107 ntBASIC2.31□□□□□ -2.04
TREX1Q9NSU2 RNU6-443P-201ENST00000384780 107 ntBASIC2.31□□□□□ -2.04
TREX1Q9NSU2 MIR325-201ENST00000385260 98 ntBASIC2.31□□□□□ -2.04
TREX1Q9NSU2 AL513475.1-201ENST00000406602 315 ntBASIC2.31□□□□□ -2.04
TREX1Q9NSU2 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.31□□□□□ -2.04
TREX1Q9NSU2 AC019070.1-201ENST00000415008 1024 ntBASIC2.31□□□□□ -2.04
TREX1Q9NSU2 AL139421.1-201ENST00000423010 169 ntBASIC2.31□□□□□ -2.04
TREX1Q9NSU2 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.31□□□□□ -2.04
TREX1Q9NSU2 AC236972.1-201ENST00000433225 199 ntBASIC2.31□□□□□ -2.04
TREX1Q9NSU2 USP9YP22-201ENST00000438971 294 ntBASIC2.31□□□□□ -2.04
TREX1Q9NSU2 SDCBPP1-201ENST00000440192 890 ntBASIC2.31□□□□□ -2.04
TREX1Q9NSU2 AL513328.1-201ENST00000446460 224 ntBASIC2.31□□□□□ -2.04
TREX1Q9NSU2 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.31□□□□□ -2.04
TREX1Q9NSU2 MTND2P24-201ENST00000453434 806 ntBASIC2.31□□□□□ -2.04
TREX1Q9NSU2 AL139109.1-201ENST00000455491 297 ntBASIC2.31□□□□□ -2.04
TREX1Q9NSU2 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.31□□□□□ -2.04
TREX1Q9NSU2 AL049874.1-201ENST00000489560 388 ntBASIC2.31□□□□□ -2.04
TREX1Q9NSU2 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
TREX1Q9NSU2 RN7SL636P-201ENST00000497504 294 ntBASIC2.31□□□□□ -2.04
TREX1Q9NSU2 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.31□□□□□ -2.04
TREX1Q9NSU2 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.31□□□□□ -2.04
TREX1Q9NSU2 HMGB3P3-201ENST00000510526 400 ntBASIC2.31□□□□□ -2.04
TREX1Q9NSU2 AC017037.2-201ENST00000513850 890 ntBASIC2.31□□□□□ -2.04
TREX1Q9NSU2 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
TREX1Q9NSU2 HSPA8P13-201ENST00000523715 472 ntBASIC2.31□□□□□ -2.04
TREX1Q9NSU2 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.31□□□□□ -2.04
TREX1Q9NSU2 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.31□□□□□ -2.04
TREX1Q9NSU2 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.31□□□□□ -2.04
TREX1Q9NSU2 MYL12BP1-201ENST00000569826 507 ntBASIC2.31□□□□□ -2.04
TREX1Q9NSU2 MIR3616-201ENST00000584070 92 ntBASIC2.31□□□□□ -2.04
TREX1Q9NSU2 AC011890.2-201ENST00000613393 294 ntBASIC2.31□□□□□ -2.04
TREX1Q9NSU2 MIR6766-201ENST00000622641 72 ntBASIC2.31□□□□□ -2.04
TREX1Q9NSU2 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.31□□□□□ -2.04
TREX1Q9NSU2 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
TREX1Q9NSU2 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.31□□□□□ -2.04
TREX1Q9NSU2 AC005832.2-201ENST00000538921 1430 ntBASIC2.31□□□□□ -2.04
TREX1Q9NSU2 CDR1-202ENST00000625883 1485 ntBASIC2.31□□□□□ -2.04
TREX1Q9NSU2 MTCO1P9-201ENST00000505577 1534 ntBASIC2.31□□□□□ -2.04
TREX1Q9NSU2 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.31□□□□□ -2.04
TREX1Q9NSU2 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TREX1Q9NSU2 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TREX1Q9NSU2 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TREX1Q9NSU2 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.3□□□□□ -2.04
TREX1Q9NSU2 FTLP6-201ENST00000355274 422 ntBASIC2.3□□□□□ -2.04
TREX1Q9NSU2 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
TREX1Q9NSU2 SNORA68.1-201ENST00000364537 132 ntBASIC2.3□□□□□ -2.04
TREX1Q9NSU2 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TREX1Q9NSU2 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
TREX1Q9NSU2 OR5H15-201ENST00000383696 930 ntBASIC2.3□□□□□ -2.04
TREX1Q9NSU2 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.3□□□□□ -2.04
TREX1Q9NSU2 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.3□□□□□ -2.04
TREX1Q9NSU2 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.3□□□□□ -2.04
TREX1Q9NSU2 MTND4P3-201ENST00000417829 541 ntBASIC2.3□□□□□ -2.04
TREX1Q9NSU2 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.3□□□□□ -2.04
TREX1Q9NSU2 AL356867.1-201ENST00000429623 299 ntBASIC2.3□□□□□ -2.04
TREX1Q9NSU2 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.3□□□□□ -2.04
TREX1Q9NSU2 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.3□□□□□ -2.04
TREX1Q9NSU2 AC009237.8-201ENST00000445492 379 ntBASIC2.3□□□□□ -2.04
TREX1Q9NSU2 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms