Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 RNA5SP124-201ENST00000362739 110 ntBASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 RNA5SP22-201ENST00000365393 109 ntBASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 RNU6-1105P-201ENST00000384774 107 ntBASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 MT-TC-201ENST00000387405 66 ntBASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 RN7SKP158-201ENST00000410453 326 ntBASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 MIR1911-201ENST00000410783 80 ntBASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 AC114491.1-201ENST00000416095 246 ntBASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 AC005019.1-201ENST00000436455 431 ntBASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 AL590399.6-201ENST00000446396 307 ntBASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 MTND5P22-201ENST00000458380 195 ntBASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 Y_RNA.654-201ENST00000497848 106 ntBASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 AL592156.1-201ENST00000508758 304 ntBASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 RPL39P5-202ENST00000512505 151 ntBASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 RN7SKP24-201ENST00000515888 284 ntBASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 RNU6-566P-201ENST00000516790 107 ntBASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 DEFB109D-201ENST00000529497 240 ntBASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 MIR4790-201ENST00000577799 79 ntBASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 XIAPP1-201ENST00000603162 600 ntBASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 CYP2C61P-201ENST00000604072 290 ntBASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 AC012468.1-201ENST00000604888 430 ntBASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 Z82243.1-201ENST00000609432 473 ntBASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 AC025034.2-201ENST00000623264 286 ntBASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 AL161912.2-201ENST00000565707 3007 ntBASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 AC093591.2-201ENST00000565254 3843 ntBASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 SNORD115-7-201ENST00000365306 82 ntBASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 MIR124-3-201ENST00000384866 87 ntBASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 AL592114.1-201ENST00000403842 483 ntBASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 AC016696.1-201ENST00000446949 318 ntBASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 AL162388.1-201ENST00000450912 352 ntBASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 AC004801.2-202ENST00000463559 283 ntBASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 RPL7P49-201ENST00000471402 708 ntBASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 TRBVA-201ENST00000498804 316 ntBASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 AC005798.1-201ENST00000513715 387 ntBASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 AC017037.2-201ENST00000513850 890 ntBASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 HIGD1AP3-201ENST00000515857 278 ntBASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 AC022634.1-201ENST00000520765 532 ntBASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 AC006064.5-201ENST00000541782 248 ntBASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 MIR5685-201ENST00000579080 79 ntBASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 AC024619.4-201ENST00000580924 316 ntBASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 AL670379.11-201ENST00000604059 253 ntBASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 AL670379.10-201ENST00000604330 253 ntBASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 AL670379.12-201ENST00000605291 253 ntBASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 AL670379.9-201ENST00000605428 253 ntBASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 AC022893.3-201ENST00000607665 437 ntBASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 uc_338.11-201ENST00000619132 160 ntBASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 AC091925.1-201ENST00000623204 462 ntBASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.75□□□□□ -1.65
PDLIM7Q9NR12 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 AC121333.1-201ENST00000567488 2709 ntBASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms