Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 SNORA71.1-201ENST00000364523 117 ntBASIC3.68□□□□□ -1.82
DDX4Q9NQI0 RNU6-1042P-201ENST00000384204 107 ntBASIC3.68□□□□□ -1.82
DDX4Q9NQI0 SNORA40.3-201ENST00000390964 122 ntBASIC3.68□□□□□ -1.82
DDX4Q9NQI0 RPL7P25-201ENST00000404151 721 ntBASIC3.68□□□□□ -1.82
DDX4Q9NQI0 TOMM22P1-201ENST00000418578 312 ntBASIC3.68□□□□□ -1.82
DDX4Q9NQI0 AL137014.1-201ENST00000420490 1226 ntBASIC3.68□□□□□ -1.82
DDX4Q9NQI0 AC099677.1-201ENST00000420575 175 ntBASIC3.68□□□□□ -1.82
DDX4Q9NQI0 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
DDX4Q9NQI0 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.68□□□□□ -1.82
DDX4Q9NQI0 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.68□□□□□ -1.82
DDX4Q9NQI0 AL353777.1-201ENST00000425552 326 ntBASIC3.68□□□□□ -1.82
DDX4Q9NQI0 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.68□□□□□ -1.82
DDX4Q9NQI0 AC236972.1-201ENST00000433225 199 ntBASIC3.68□□□□□ -1.82
DDX4Q9NQI0 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.68□□□□□ -1.82
DDX4Q9NQI0 Z99127.3-201ENST00000448158 395 ntBASIC3.68□□□□□ -1.82
DDX4Q9NQI0 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.68□□□□□ -1.82
DDX4Q9NQI0 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.68□□□□□ -1.82
DDX4Q9NQI0 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.68□□□□□ -1.82
DDX4Q9NQI0 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.68□□□□□ -1.82
DDX4Q9NQI0 NDUFB9P3-201ENST00000521269 501 ntBASIC3.68□□□□□ -1.82
DDX4Q9NQI0 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.68□□□□□ -1.82
DDX4Q9NQI0 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.68□□□□□ -1.82
DDX4Q9NQI0 AGGF1P4-201ENST00000568249 801 ntBASIC3.68□□□□□ -1.82
DDX4Q9NQI0 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.68□□□□□ -1.82
DDX4Q9NQI0 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.68□□□□□ -1.82
DDX4Q9NQI0 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.68□□□□□ -1.82
DDX4Q9NQI0 AC006254.3-201ENST00000603353 884 ntBASIC3.68□□□□□ -1.82
DDX4Q9NQI0 OR10AB1P-201ENST00000609613 938 ntBASIC3.68□□□□□ -1.82
DDX4Q9NQI0 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.68□□□□□ -1.82
DDX4Q9NQI0 AP001506.1-201ENST00000615444 211 ntBASIC3.68□□□□□ -1.82
DDX4Q9NQI0 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
DDX4Q9NQI0 AC091903.1-201ENST00000624322 454 ntBASIC3.68□□□□□ -1.82
DDX4Q9NQI0 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.68□□□□□ -1.82
DDX4Q9NQI0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
DDX4Q9NQI0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
DDX4Q9NQI0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
DDX4Q9NQI0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 MIR423-201ENST00000362201 94 ntBASIC3.67□□□□□ -1.82
DDX4Q9NQI0 Y_RNA.46-201ENST00000362695 102 ntBASIC3.67□□□□□ -1.82
DDX4Q9NQI0 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 SNORD15B-201ENST00000384714 146 ntBASIC3.67□□□□□ -1.82
DDX4Q9NQI0 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 DEFB108C-201ENST00000400154 252 ntBASIC3.67□□□□□ -1.82
DDX4Q9NQI0 RPS20P2-201ENST00000402520 389 ntBASIC3.67□□□□□ -1.82
DDX4Q9NQI0 Z98941.1-201ENST00000407764 100 ntBASIC3.67□□□□□ -1.82
DDX4Q9NQI0 RNU6-712P-201ENST00000410558 100 ntBASIC3.67□□□□□ -1.82
DDX4Q9NQI0 AC092447.6-201ENST00000414578 210 ntBASIC3.67□□□□□ -1.82
DDX4Q9NQI0 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 AL139132.1-201ENST00000431587 344 ntBASIC3.67□□□□□ -1.82
DDX4Q9NQI0 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 UBE2DNL-203ENST00000474922 222 ntBASIC3.67□□□□□ -1.82
DDX4Q9NQI0 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 RPL23AP94-201ENST00000512518 302 ntBASIC3.67□□□□□ -1.82
DDX4Q9NQI0 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 AP003467.2-201ENST00000520175 319 ntBASIC3.67□□□□□ -1.82
DDX4Q9NQI0 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 ZNF519P3-201ENST00000557158 1032 ntBASIC3.67□□□□□ -1.82
DDX4Q9NQI0 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 AC034268.2-201ENST00000571784 482 ntBASIC3.67□□□□□ -1.82
DDX4Q9NQI0 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 MIR3682-201ENST00000581338 84 ntBASIC3.67□□□□□ -1.82
DDX4Q9NQI0 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 TUG1_1.1-201ENST00000610654 145 ntBASIC3.67□□□□□ -1.82
DDX4Q9NQI0 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
DDX4Q9NQI0 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.67□□□□□ -1.82
DDX4Q9NQI0 MTND5P33-201ENST00000571250 1450 ntBASIC3.67□□□□□ -1.82
DDX4Q9NQI0 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
DDX4Q9NQI0 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.66□□□□□ -1.82
DDX4Q9NQI0 AC073325.2-201ENST00000339545 159 ntBASIC3.66□□□□□ -1.82
DDX4Q9NQI0 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
DDX4Q9NQI0 Y_RNA.359-201ENST00000365498 102 ntBASIC3.66□□□□□ -1.82
DDX4Q9NQI0 AL583834.1-201ENST00000406943 343 ntBASIC3.66□□□□□ -1.82
DDX4Q9NQI0 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.66□□□□□ -1.82
DDX4Q9NQI0 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.66□□□□□ -1.82
DDX4Q9NQI0 CCDC58P2-201ENST00000417131 366 ntBASIC3.66□□□□□ -1.82
DDX4Q9NQI0 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.66□□□□□ -1.82
DDX4Q9NQI0 AL589823.1-201ENST00000429577 183 ntBASIC3.66□□□□□ -1.82
DDX4Q9NQI0 DLGAP5P1-201ENST00000430307 464 ntBASIC3.66□□□□□ -1.82
DDX4Q9NQI0 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.66□□□□□ -1.82
DDX4Q9NQI0 HMGN2P20-201ENST00000437531 273 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms