Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.22□□□□□ -1.89
SIX2Q9NPC8 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.22□□□□□ -1.89
SIX2Q9NPC8 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SIX2Q9NPC8 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.22□□□□□ -1.89
SIX2Q9NPC8 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.22□□□□□ -1.89
SIX2Q9NPC8 SETP2-201ENST00000553886 926 ntBASIC3.22□□□□□ -1.89
SIX2Q9NPC8 AC007424.1-203ENST00000554613 687 ntBASIC3.22□□□□□ -1.89
SIX2Q9NPC8 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.22□□□□□ -1.89
SIX2Q9NPC8 AC010680.3-201ENST00000604215 520 ntBASIC3.22□□□□□ -1.89
SIX2Q9NPC8 AC055876.5-201ENST00000605667 259 ntBASIC3.22□□□□□ -1.89
SIX2Q9NPC8 AC011816.2-201ENST00000607089 556 ntBASIC3.22□□□□□ -1.89
SIX2Q9NPC8 RNU6-87P-201ENST00000607561 108 ntBASIC3.22□□□□□ -1.89
SIX2Q9NPC8 AC107294.3-201ENST00000609211 526 ntBASIC3.22□□□□□ -1.89
SIX2Q9NPC8 AC103710.1-201ENST00000610003 901 ntBASIC3.22□□□□□ -1.89
SIX2Q9NPC8 AL355472.4-201ENST00000610233 626 ntBASIC3.22□□□□□ -1.89
SIX2Q9NPC8 AC091304.9-201ENST00000612091 226 ntBASIC3.22□□□□□ -1.89
SIX2Q9NPC8 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.22□□□□□ -1.89
SIX2Q9NPC8 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.22□□□□□ -1.89
SIX2Q9NPC8 AC095031.1-201ENST00000623685 672 ntBASIC3.22□□□□□ -1.89
SIX2Q9NPC8 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SIX2Q9NPC8 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
SIX2Q9NPC8 FARSBP1-201ENST00000435808 1778 ntBASIC3.21□□□□□ -1.9
SIX2Q9NPC8 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SIX2Q9NPC8 U8.3-201ENST00000363321 132 ntBASIC3.21□□□□□ -1.9
SIX2Q9NPC8 RNU6-259P-201ENST00000383999 107 ntBASIC3.21□□□□□ -1.9
SIX2Q9NPC8 RNU6-114P-201ENST00000384704 105 ntBASIC3.21□□□□□ -1.9
SIX2Q9NPC8 MIR124-3-201ENST00000384866 87 ntBASIC3.21□□□□□ -1.9
SIX2Q9NPC8 U3.19-201ENST00000390893 196 ntBASIC3.21□□□□□ -1.9
SIX2Q9NPC8 RNU6-837P-201ENST00000391056 108 ntBASIC3.21□□□□□ -1.9
SIX2Q9NPC8 CCNG1P1-201ENST00000406783 885 ntBASIC3.21□□□□□ -1.9
SIX2Q9NPC8 U3.42-201ENST00000408746 214 ntBASIC3.21□□□□□ -1.9
SIX2Q9NPC8 RNU2-47P-201ENST00000410649 186 ntBASIC3.21□□□□□ -1.9
SIX2Q9NPC8 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.21□□□□□ -1.9
SIX2Q9NPC8 C1DP2-201ENST00000418167 426 ntBASIC3.21□□□□□ -1.9
SIX2Q9NPC8 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.21□□□□□ -1.9
SIX2Q9NPC8 AL589872.1-201ENST00000426602 288 ntBASIC3.21□□□□□ -1.9
SIX2Q9NPC8 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.21□□□□□ -1.9
SIX2Q9NPC8 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.21□□□□□ -1.9
SIX2Q9NPC8 UBE2V1P13-201ENST00000436983 439 ntBASIC3.21□□□□□ -1.9
SIX2Q9NPC8 AC073614.1-201ENST00000438690 650 ntBASIC3.21□□□□□ -1.9
SIX2Q9NPC8 DNAJC19P4-201ENST00000440115 345 ntBASIC3.21□□□□□ -1.9
SIX2Q9NPC8 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SIX2Q9NPC8 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.21□□□□□ -1.9
SIX2Q9NPC8 RABEPKP1-201ENST00000440529 1026 ntBASIC3.21□□□□□ -1.9
SIX2Q9NPC8 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.21□□□□□ -1.9
SIX2Q9NPC8 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.21□□□□□ -1.9
SIX2Q9NPC8 SNORD108-201ENST00000459332 71 ntBASIC3.21□□□□□ -1.9
SIX2Q9NPC8 RN7SL807P-201ENST00000470923 297 ntBASIC3.21□□□□□ -1.9
SIX2Q9NPC8 MTND1P3-201ENST00000484956 952 ntBASIC3.21□□□□□ -1.9
SIX2Q9NPC8 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.21□□□□□ -1.9
SIX2Q9NPC8 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.21□□□□□ -1.9
SIX2Q9NPC8 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
SIX2Q9NPC8 RNU2-46P-201ENST00000517038 113 ntBASIC3.21□□□□□ -1.9
SIX2Q9NPC8 AP003181.2-201ENST00000528941 181 ntBASIC3.21□□□□□ -1.9
SIX2Q9NPC8 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.21□□□□□ -1.9
SIX2Q9NPC8 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.21□□□□□ -1.9
SIX2Q9NPC8 AL845331.3-202ENST00000562856 261 ntBASIC3.21□□□□□ -1.9
SIX2Q9NPC8 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.21□□□□□ -1.9
SIX2Q9NPC8 AC060771.1-201ENST00000582031 164 ntBASIC3.21□□□□□ -1.9
SIX2Q9NPC8 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.21□□□□□ -1.9
SIX2Q9NPC8 AC011468.4-201ENST00000603942 409 ntBASIC3.21□□□□□ -1.9
SIX2Q9NPC8 HMGN2P28-201ENST00000606102 262 ntBASIC3.21□□□□□ -1.9
SIX2Q9NPC8 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.21□□□□□ -1.9
SIX2Q9NPC8 AL356585.4-201ENST00000623078 1229 ntBASIC3.21□□□□□ -1.9
SIX2Q9NPC8 PISRT1-201ENST00000626175 531 ntBASIC3.21□□□□□ -1.9
SIX2Q9NPC8 AC010149.2-201ENST00000637608 315 ntBASIC3.21□□□□□ -1.9
SIX2Q9NPC8 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.21□□□□□ -1.9
SIX2Q9NPC8 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SIX2Q9NPC8 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.21□□□□□ -1.9
SIX2Q9NPC8 AL021368.2-201ENST00000606125 5352 ntBASIC3.2□□□□□ -1.9
SIX2Q9NPC8 AC008264.2-201ENST00000610193 3731 ntBASIC3.2□□□□□ -1.9
SIX2Q9NPC8 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SIX2Q9NPC8 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SIX2Q9NPC8 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
SIX2Q9NPC8 AC244517.1-201ENST00000606030 2086 ntBASIC3.2□□□□□ -1.9
SIX2Q9NPC8 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
SIX2Q9NPC8 GNG5P1-201ENST00000255500 204 ntBASIC3.2□□□□□ -1.9
SIX2Q9NPC8 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SIX2Q9NPC8 RNA5SP374-201ENST00000362939 125 ntBASIC3.2□□□□□ -1.9
SIX2Q9NPC8 RNU6-1249P-201ENST00000363237 111 ntBASIC3.2□□□□□ -1.9
SIX2Q9NPC8 RNY4P34-201ENST00000364779 95 ntBASIC3.2□□□□□ -1.9
SIX2Q9NPC8 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.2□□□□□ -1.9
SIX2Q9NPC8 RNU5A-6P-201ENST00000384136 116 ntBASIC3.2□□□□□ -1.9
SIX2Q9NPC8 Y_RNA.516-201ENST00000384541 124 ntBASIC3.2□□□□□ -1.9
SIX2Q9NPC8 MIR181B1-201ENST00000385240 110 ntBASIC3.2□□□□□ -1.9
SIX2Q9NPC8 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SIX2Q9NPC8 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.2□□□□□ -1.9
SIX2Q9NPC8 ELOCP17-201ENST00000414751 326 ntBASIC3.2□□□□□ -1.9
SIX2Q9NPC8 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.2□□□□□ -1.9
SIX2Q9NPC8 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SIX2Q9NPC8 AC092832.1-201ENST00000422934 400 ntBASIC3.2□□□□□ -1.9
SIX2Q9NPC8 DUTP6-201ENST00000425573 462 ntBASIC3.2□□□□□ -1.9
SIX2Q9NPC8 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.2□□□□□ -1.9
SIX2Q9NPC8 MTND4LP10-201ENST00000435146 291 ntBASIC3.2□□□□□ -1.9
SIX2Q9NPC8 AC009969.1-201ENST00000438726 172 ntBASIC3.2□□□□□ -1.9
SIX2Q9NPC8 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.2□□□□□ -1.9
SIX2Q9NPC8 NANOGNBP1-201ENST00000448444 480 ntBASIC3.2□□□□□ -1.9
SIX2Q9NPC8 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.2□□□□□ -1.9
SIX2Q9NPC8 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.2□□□□□ -1.9
SIX2Q9NPC8 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms