Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.87□□□□□ -1.79
USP29Q9HBJ7 RPL36AP51-201ENST00000487216 318 ntBASIC3.87□□□□□ -1.79
USP29Q9HBJ7 RPL7P23-201ENST00000493874 747 ntBASIC3.87□□□□□ -1.79
USP29Q9HBJ7 AC068305.1-201ENST00000497406 726 ntBASIC3.87□□□□□ -1.79
USP29Q9HBJ7 AC135721.1-201ENST00000497954 479 ntBASIC3.87□□□□□ -1.79
USP29Q9HBJ7 AC026403.1-201ENST00000518938 295 ntBASIC3.87□□□□□ -1.79
USP29Q9HBJ7 MTND1P35-201ENST00000526739 508 ntBASIC3.87□□□□□ -1.79
USP29Q9HBJ7 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.87□□□□□ -1.79
USP29Q9HBJ7 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.87□□□□□ -1.79
USP29Q9HBJ7 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.87□□□□□ -1.79
USP29Q9HBJ7 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.87□□□□□ -1.79
USP29Q9HBJ7 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.87□□□□□ -1.79
USP29Q9HBJ7 OR4K8P-201ENST00000578842 1048 ntBASIC3.87□□□□□ -1.79
USP29Q9HBJ7 AC010928.3-201ENST00000587712 541 ntBASIC3.87□□□□□ -1.79
USP29Q9HBJ7 GLUD1P4-201ENST00000590914 418 ntBASIC3.87□□□□□ -1.79
USP29Q9HBJ7 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.87□□□□□ -1.79
USP29Q9HBJ7 AL031176.1-201ENST00000604554 466 ntBASIC3.87□□□□□ -1.79
USP29Q9HBJ7 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.87□□□□□ -1.79
USP29Q9HBJ7 AL121772.2-201ENST00000614331 297 ntBASIC3.87□□□□□ -1.79
USP29Q9HBJ7 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
USP29Q9HBJ7 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
USP29Q9HBJ7 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
USP29Q9HBJ7 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP29Q9HBJ7 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP29Q9HBJ7 Y_RNA.38-201ENST00000362617 102 ntBASIC3.86□□□□□ -1.79
USP29Q9HBJ7 U3.11-201ENST00000364476 212 ntBASIC3.86□□□□□ -1.79
USP29Q9HBJ7 RNU5E-4P-201ENST00000364931 120 ntBASIC3.86□□□□□ -1.79
USP29Q9HBJ7 MIR30B-201ENST00000384850 88 ntBASIC3.86□□□□□ -1.79
USP29Q9HBJ7 MIR135A2-201ENST00000384854 100 ntBASIC3.86□□□□□ -1.79
USP29Q9HBJ7 RNU6-516P-201ENST00000411381 104 ntBASIC3.86□□□□□ -1.79
USP29Q9HBJ7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.86□□□□□ -1.79
USP29Q9HBJ7 RPL30P16-201ENST00000419341 429 ntBASIC3.86□□□□□ -1.79
USP29Q9HBJ7 BEND7P1-201ENST00000422058 457 ntBASIC3.86□□□□□ -1.79
USP29Q9HBJ7 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.86□□□□□ -1.79
USP29Q9HBJ7 RPL7P54-201ENST00000438336 674 ntBASIC3.86□□□□□ -1.79
USP29Q9HBJ7 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.86□□□□□ -1.79
USP29Q9HBJ7 AL671855.1-201ENST00000446875 1203 ntBASIC3.86□□□□□ -1.79
USP29Q9HBJ7 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.86□□□□□ -1.79
USP29Q9HBJ7 AC006480.1-201ENST00000449887 378 ntBASIC3.86□□□□□ -1.79
USP29Q9HBJ7 AC083798.1-201ENST00000472671 131 ntBASIC3.86□□□□□ -1.79
USP29Q9HBJ7 RPS3AP50-201ENST00000487064 803 ntBASIC3.86□□□□□ -1.79
USP29Q9HBJ7 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.86□□□□□ -1.79
USP29Q9HBJ7 RNU6-1281P-201ENST00000516223 105 ntBASIC3.86□□□□□ -1.79
USP29Q9HBJ7 RNU6-358P-201ENST00000516564 75 ntBASIC3.86□□□□□ -1.79
USP29Q9HBJ7 RNU6-835P-201ENST00000516974 104 ntBASIC3.86□□□□□ -1.79
USP29Q9HBJ7 AC022695.1-201ENST00000522089 237 ntBASIC3.86□□□□□ -1.79
USP29Q9HBJ7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.86□□□□□ -1.79
USP29Q9HBJ7 DEFB108D-201ENST00000527787 222 ntBASIC3.86□□□□□ -1.79
USP29Q9HBJ7 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.86□□□□□ -1.79
USP29Q9HBJ7 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
USP29Q9HBJ7 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.86□□□□□ -1.79
USP29Q9HBJ7 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.86□□□□□ -1.79
USP29Q9HBJ7 AC006270.2-201ENST00000578523 652 ntBASIC3.86□□□□□ -1.79
USP29Q9HBJ7 MIR4293-201ENST00000584305 78 ntBASIC3.86□□□□□ -1.79
USP29Q9HBJ7 AC008752.3-201ENST00000588113 712 ntBASIC3.86□□□□□ -1.79
USP29Q9HBJ7 AC006254.3-201ENST00000603353 884 ntBASIC3.86□□□□□ -1.79
USP29Q9HBJ7 HMGN2P28-201ENST00000606102 262 ntBASIC3.86□□□□□ -1.79
USP29Q9HBJ7 AC019176.2-201ENST00000611579 315 ntBASIC3.86□□□□□ -1.79
USP29Q9HBJ7 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.86□□□□□ -1.79
USP29Q9HBJ7 AC093838.1-201ENST00000613014 469 ntBASIC3.86□□□□□ -1.79
USP29Q9HBJ7 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.86□□□□□ -1.79
USP29Q9HBJ7 AC092794.2-201ENST00000620933 563 ntBASIC3.86□□□□□ -1.79
USP29Q9HBJ7 AC019226.1-201ENST00000625666 515 ntBASIC3.86□□□□□ -1.79
USP29Q9HBJ7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
USP29Q9HBJ7 ZNF680P1-201ENST00000436625 1469 ntBASIC3.86□□□□□ -1.79
USP29Q9HBJ7 AC006504.1-201ENST00000562493 3666 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 SNORA63.1-201ENST00000362493 131 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 SNORD56.2-201ENST00000363242 71 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 RNU5E-8P-201ENST00000363502 116 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 Y_RNA.381-201ENST00000365666 102 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 RNU6-637P-201ENST00000384050 107 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 Y_RNA.573-201ENST00000384763 105 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 RNU6-1158P-201ENST00000391167 107 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 AC138393.2-201ENST00000414742 246 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 YME1L1P1-201ENST00000429435 297 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 NDUFB1P1-201ENST00000435191 180 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 AC005094.1-201ENST00000440420 368 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 AC079781.2-201ENST00000446424 169 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 AC016696.1-201ENST00000446949 318 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 AL049714.1-201ENST00000466686 347 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 HSPD1P15-201ENST00000505573 1122 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 AC023141.12-201ENST00000512399 199 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms