Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AC106754.1-201ENST00000562632 1513 ntBASIC3.03□□□□□ -1.92
RPAP3Q9H6T3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
RPAP3Q9H6T3 AC099786.3-201ENST00000565735 1410 ntBASIC3.03□□□□□ -1.92
RPAP3Q9H6T3 AC009812.4-201ENST00000569134 1805 ntBASIC3.03□□□□□ -1.92
RPAP3Q9H6T3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RPAP3Q9H6T3 MIR1284-201ENST00000408337 120 ntBASIC3.03□□□□□ -1.92
RPAP3Q9H6T3 RPLP0P7-201ENST00000416050 667 ntBASIC3.03□□□□□ -1.92
RPAP3Q9H6T3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.03□□□□□ -1.92
RPAP3Q9H6T3 AL390023.1-201ENST00000428836 262 ntBASIC3.03□□□□□ -1.92
RPAP3Q9H6T3 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.03□□□□□ -1.92
RPAP3Q9H6T3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.03□□□□□ -1.92
RPAP3Q9H6T3 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.03□□□□□ -1.92
RPAP3Q9H6T3 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.03□□□□□ -1.92
RPAP3Q9H6T3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.03□□□□□ -1.92
RPAP3Q9H6T3 RPL31P60-201ENST00000478450 367 ntBASIC3.03□□□□□ -1.92
RPAP3Q9H6T3 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.03□□□□□ -1.92
RPAP3Q9H6T3 AC109445.1-201ENST00000512356 383 ntBASIC3.03□□□□□ -1.92
RPAP3Q9H6T3 SNORA9.3-201ENST00000516383 129 ntBASIC3.03□□□□□ -1.92
RPAP3Q9H6T3 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.03□□□□□ -1.92
RPAP3Q9H6T3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.03□□□□□ -1.92
RPAP3Q9H6T3 AP000867.2-201ENST00000532468 320 ntBASIC3.03□□□□□ -1.92
RPAP3Q9H6T3 CYCSP2-201ENST00000558168 301 ntBASIC3.03□□□□□ -1.92
RPAP3Q9H6T3 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.03□□□□□ -1.92
RPAP3Q9H6T3 AC090615.1-201ENST00000577519 154 ntBASIC3.03□□□□□ -1.92
RPAP3Q9H6T3 HSPE1P7-201ENST00000604681 321 ntBASIC3.03□□□□□ -1.92
RPAP3Q9H6T3 AC024560.3-201ENST00000608482 349 ntBASIC3.03□□□□□ -1.92
RPAP3Q9H6T3 AC069234.5-201ENST00000611056 416 ntBASIC3.03□□□□□ -1.92
RPAP3Q9H6T3 DUXAP10-204ENST00000612052 616 ntBASIC3.03□□□□□ -1.92
RPAP3Q9H6T3 ELF2P3-201ENST00000445099 1506 ntBASIC3.03□□□□□ -1.92
RPAP3Q9H6T3 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RPAP3Q9H6T3 AC005539.1-201ENST00000443768 1479 ntBASIC3.03□□□□□ -1.93
RPAP3Q9H6T3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
RPAP3Q9H6T3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
RPAP3Q9H6T3 RNU4-92P-201ENST00000363783 136 ntBASIC3.02□□□□□ -1.93
RPAP3Q9H6T3 RNU6-289P-201ENST00000364093 107 ntBASIC3.02□□□□□ -1.93
RPAP3Q9H6T3 RNU6-906P-201ENST00000384700 70 ntBASIC3.02□□□□□ -1.93
RPAP3Q9H6T3 AL512633.1-201ENST00000399931 655 ntBASIC3.02□□□□□ -1.93
RPAP3Q9H6T3 AL139095.1-201ENST00000404326 391 ntBASIC3.02□□□□□ -1.93
RPAP3Q9H6T3 MIR1261-201ENST00000408659 82 ntBASIC3.02□□□□□ -1.93
RPAP3Q9H6T3 RNU2-43P-201ENST00000410306 190 ntBASIC3.02□□□□□ -1.93
RPAP3Q9H6T3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.02□□□□□ -1.93
RPAP3Q9H6T3 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.02□□□□□ -1.93
RPAP3Q9H6T3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.02□□□□□ -1.93
RPAP3Q9H6T3 RNA5SP320-201ENST00000516263 124 ntBASIC3.02□□□□□ -1.93
RPAP3Q9H6T3 SNORA70.16-201ENST00000516390 95 ntBASIC3.02□□□□□ -1.93
RPAP3Q9H6T3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.02□□□□□ -1.93
RPAP3Q9H6T3 AC109329.2-201ENST00000519658 482 ntBASIC3.02□□□□□ -1.93
RPAP3Q9H6T3 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.02□□□□□ -1.93
RPAP3Q9H6T3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RPAP3Q9H6T3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RPAP3Q9H6T3 AC055876.1-202ENST00000567053 138 ntBASIC3.02□□□□□ -1.93
RPAP3Q9H6T3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.02□□□□□ -1.93
RPAP3Q9H6T3 AC013444.2-201ENST00000603317 787 ntBASIC3.02□□□□□ -1.93
RPAP3Q9H6T3 AC080013.3-201ENST00000606839 578 ntBASIC3.02□□□□□ -1.93
RPAP3Q9H6T3 AL357080.1-201ENST00000617394 239 ntBASIC3.02□□□□□ -1.93
RPAP3Q9H6T3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.02□□□□□ -1.93
RPAP3Q9H6T3 AL445264.1-201ENST00000621719 171 ntBASIC3.02□□□□□ -1.93
RPAP3Q9H6T3 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 AC108206.1-201ENST00000570186 4159 ntBASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 RPS3AP24-201ENST00000407896 734 ntBASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 SUMO1P4-201ENST00000429430 302 ntBASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 OR4K11P-201ENST00000431829 904 ntBASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 RPS25P9-201ENST00000435591 252 ntBASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 FGF7P5-201ENST00000441829 291 ntBASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 AL121871.1-201ENST00000443413 436 ntBASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 EEF1E1P1-201ENST00000446998 430 ntBASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 AC002381.1-201ENST00000447049 280 ntBASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 SNRPGP6-201ENST00000451124 220 ntBASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 AL359385.1-201ENST00000456509 365 ntBASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 FAM172BP-201ENST00000487497 1089 ntBASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 HMGB1P36-201ENST00000487709 576 ntBASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 AC109464.2-201ENST00000510242 943 ntBASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 SCARNA1-201ENST00000517138 166 ntBASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 AC243972.3-201ENST00000539655 198 ntBASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 AL132857.1-201ENST00000555180 708 ntBASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 AL049838.1-201ENST00000563647 981 ntBASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 AC004987.4-201ENST00000603383 338 ntBASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 AC136601.2-201ENST00000604356 474 ntBASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 AL450472.3-201ENST00000615578 367 ntBASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 AC006386.1-201ENST00000619436 415 ntBASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 AC008669.1-201ENST00000565823 2178 ntBASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RPAP3Q9H6T3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3□□□□□ -1.93
RPAP3Q9H6T3 AC135776.4-201ENST00000624300 1904 ntBASIC3□□□□□ -1.93
RPAP3Q9H6T3 Y_RNA.234-201ENST00000364409 97 ntBASIC3□□□□□ -1.93
RPAP3Q9H6T3 RNU6-636P-201ENST00000384598 107 ntBASIC3□□□□□ -1.93
RPAP3Q9H6T3 AL096701.2-201ENST00000416920 238 ntBASIC3□□□□□ -1.93
RPAP3Q9H6T3 AC092427.1-202ENST00000430569 476 ntBASIC3□□□□□ -1.93
RPAP3Q9H6T3 MTCO2P20-201ENST00000437339 673 ntBASIC3□□□□□ -1.93
RPAP3Q9H6T3 MTND5P14-201ENST00000441481 1267 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms