Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 RPL22P17-201ENST00000438729 315 ntBASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 AL445567.1-201ENST00000439121 144 ntBASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 KATNBL1P6-201ENST00000453433 915 ntBASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 RNU7-170P-201ENST00000459303 61 ntBASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 snoU13.26-201ENST00000459452 105 ntBASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 VN1R17P-201ENST00000472048 1090 ntBASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 AC096751.1-202ENST00000502691 1067 ntBASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 ANXA2P1-201ENST00000505539 926 ntBASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 AC060771.1-201ENST00000582031 164 ntBASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 AC091965.4-201ENST00000607691 587 ntBASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 AC095031.1-201ENST00000623685 672 ntBASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 MIR3974-201ENST00000637126 96 ntBASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 AC007496.3-201ENST00000624987 3443 ntBASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
ZNF541Q9H0D2 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ZNF541Q9H0D2 AL365184.2-201ENST00000431139 435 ntBASIC3.48□□□□□ -1.85
ZNF541Q9H0D2 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.48□□□□□ -1.85
ZNF541Q9H0D2 RPS20P5-201ENST00000434808 360 ntBASIC3.48□□□□□ -1.85
ZNF541Q9H0D2 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.48□□□□□ -1.85
ZNF541Q9H0D2 RPS12P18-201ENST00000442381 270 ntBASIC3.48□□□□□ -1.85
ZNF541Q9H0D2 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ZNF541Q9H0D2 MTND3P7-201ENST00000474435 343 ntBASIC3.48□□□□□ -1.85
ZNF541Q9H0D2 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.48□□□□□ -1.85
ZNF541Q9H0D2 RNA5SP24-201ENST00000516478 95 ntBASIC3.48□□□□□ -1.85
ZNF541Q9H0D2 AC106038.2-201ENST00000520706 568 ntBASIC3.48□□□□□ -1.85
ZNF541Q9H0D2 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.48□□□□□ -1.85
ZNF541Q9H0D2 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.48□□□□□ -1.85
ZNF541Q9H0D2 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.48□□□□□ -1.85
ZNF541Q9H0D2 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.48□□□□□ -1.85
ZNF541Q9H0D2 AP001429.1-201ENST00000602568 530 ntBASIC3.48□□□□□ -1.85
ZNF541Q9H0D2 WISP1-OT1-201ENST00000602893 642 ntBASIC3.48□□□□□ -1.85
ZNF541Q9H0D2 AL592295.2-201ENST00000612578 206 ntBASIC3.48□□□□□ -1.85
ZNF541Q9H0D2 AL355810.1-201ENST00000614629 552 ntBASIC3.48□□□□□ -1.85
ZNF541Q9H0D2 MIR7844-201ENST00000616161 122 ntBASIC3.48□□□□□ -1.85
ZNF541Q9H0D2 AC091965.5-201ENST00000624785 342 ntBASIC3.48□□□□□ -1.85
ZNF541Q9H0D2 AC093591.3-201ENST00000634516 308 ntBASIC3.48□□□□□ -1.85
ZNF541Q9H0D2 CU459211.1-201ENST00000635667 749 ntBASIC3.48□□□□□ -1.85
ZNF541Q9H0D2 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.48□□□□□ -1.85
ZNF541Q9H0D2 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.48□□□□□ -1.85
ZNF541Q9H0D2 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.48□□□□□ -1.85
ZNF541Q9H0D2 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
ZNF541Q9H0D2 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ZNF541Q9H0D2 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
ZNF541Q9H0D2 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 SKINT1L-201ENST00000401057 817 ntBASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 RNU6-516P-201ENST00000411381 104 ntBASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 AL513477.1-202ENST00000417061 214 ntBASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 AC009518.2-201ENST00000418056 731 ntBASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 AC090960.1-201ENST00000421072 306 ntBASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 MTCO1P39-201ENST00000426148 480 ntBASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 AP1S2P1-201ENST00000457344 379 ntBASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 SNORD121B-201ENST00000458838 81 ntBASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 AC087373.1-201ENST00000524920 491 ntBASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 MIR3690-201ENST00000580266 75 ntBASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 AC079089.3-201ENST00000603094 673 ntBASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 AP001981.2-201ENST00000603241 418 ntBASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 AC105129.3-201ENST00000605455 485 ntBASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 AL360181.4-201ENST00000621752 134 ntBASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 AC064859.1-201ENST00000624741 174 ntBASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 U6.98-201ENST00000637157 84 ntBASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 PABPC1P9-201ENST00000426076 1612 ntBASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 AC005832.2-201ENST00000538921 1430 ntBASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
ZNF541Q9H0D2 MIR504-201ENST00000385065 83 ntBASIC3.46□□□□□ -1.85
ZNF541Q9H0D2 MT-TH-201ENST00000387441 69 ntBASIC3.46□□□□□ -1.85
ZNF541Q9H0D2 RNU6-882P-201ENST00000391025 103 ntBASIC3.46□□□□□ -1.85
ZNF541Q9H0D2 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.46□□□□□ -1.85
ZNF541Q9H0D2 Z99497.1-201ENST00000421282 135 ntBASIC3.46□□□□□ -1.85
ZNF541Q9H0D2 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.46□□□□□ -1.85
ZNF541Q9H0D2 AC004866.2-201ENST00000438285 481 ntBASIC3.46□□□□□ -1.85
ZNF541Q9H0D2 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.46□□□□□ -1.85
ZNF541Q9H0D2 AL592447.1-201ENST00000447592 540 ntBASIC3.46□□□□□ -1.85
ZNF541Q9H0D2 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.46□□□□□ -1.85
ZNF541Q9H0D2 MTND1P9-201ENST00000453775 944 ntBASIC3.46□□□□□ -1.85
ZNF541Q9H0D2 MTCO1P42-201ENST00000457379 726 ntBASIC3.46□□□□□ -1.85
ZNF541Q9H0D2 HMGN1P18-201ENST00000457642 277 ntBASIC3.46□□□□□ -1.85
ZNF541Q9H0D2 AL049830.2-201ENST00000480072 201 ntBASIC3.46□□□□□ -1.85
ZNF541Q9H0D2 RNU1-143P-201ENST00000516296 146 ntBASIC3.46□□□□□ -1.85
ZNF541Q9H0D2 SNORA31.8-201ENST00000516327 108 ntBASIC3.46□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms