Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RNU7-23P-201ENST00000459465 62 ntBASIC2.45□□□□□ -2.02
UPF3BQ9BZI7 AC072039.1-201ENST00000477611 581 ntBASIC2.45□□□□□ -2.02
UPF3BQ9BZI7 OR52A4P-202ENST00000481634 799 ntBASIC2.45□□□□□ -2.02
UPF3BQ9BZI7 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.45□□□□□ -2.02
UPF3BQ9BZI7 AC006390.1-201ENST00000508068 283 ntBASIC2.45□□□□□ -2.02
UPF3BQ9BZI7 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.45□□□□□ -2.02
UPF3BQ9BZI7 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
UPF3BQ9BZI7 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.45□□□□□ -2.02
UPF3BQ9BZI7 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.45□□□□□ -2.02
UPF3BQ9BZI7 AC023043.2-201ENST00000589678 1026 ntBASIC2.45□□□□□ -2.02
UPF3BQ9BZI7 AC097504.2-201ENST00000608088 454 ntBASIC2.45□□□□□ -2.02
UPF3BQ9BZI7 AC092954.1-201ENST00000609121 445 ntBASIC2.45□□□□□ -2.02
UPF3BQ9BZI7 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.45□□□□□ -2.02
UPF3BQ9BZI7 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
UPF3BQ9BZI7 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.44□□□□□ -2.02
UPF3BQ9BZI7 HMGB1P5-201ENST00000255320 642 ntBASIC2.44□□□□□ -2.02
UPF3BQ9BZI7 AL358075.3-201ENST00000426289 226 ntBASIC2.44□□□□□ -2.02
UPF3BQ9BZI7 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.44□□□□□ -2.02
UPF3BQ9BZI7 ARPC3P1-201ENST00000437218 533 ntBASIC2.44□□□□□ -2.02
UPF3BQ9BZI7 RPL7P54-201ENST00000438336 674 ntBASIC2.44□□□□□ -2.02
UPF3BQ9BZI7 AC002542.1-201ENST00000440683 193 ntBASIC2.44□□□□□ -2.02
UPF3BQ9BZI7 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.44□□□□□ -2.02
UPF3BQ9BZI7 DPPA3P1-201ENST00000448050 469 ntBASIC2.44□□□□□ -2.02
UPF3BQ9BZI7 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.44□□□□□ -2.02
UPF3BQ9BZI7 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.44□□□□□ -2.02
UPF3BQ9BZI7 PNPLA4P1-201ENST00000458328 305 ntBASIC2.44□□□□□ -2.02
UPF3BQ9BZI7 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.44□□□□□ -2.02
UPF3BQ9BZI7 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
UPF3BQ9BZI7 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.44□□□□□ -2.02
UPF3BQ9BZI7 RPS3AP23-202ENST00000574601 686 ntBASIC2.44□□□□□ -2.02
UPF3BQ9BZI7 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.44□□□□□ -2.02
UPF3BQ9BZI7 OR4K7P-201ENST00000580232 945 ntBASIC2.44□□□□□ -2.02
UPF3BQ9BZI7 AC002984.1-201ENST00000591692 448 ntBASIC2.44□□□□□ -2.02
UPF3BQ9BZI7 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.44□□□□□ -2.02
UPF3BQ9BZI7 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.44□□□□□ -2.02
UPF3BQ9BZI7 SNRPGP19-201ENST00000603826 189 ntBASIC2.44□□□□□ -2.02
UPF3BQ9BZI7 Y_RNA.783-201ENST00000613546 102 ntBASIC2.44□□□□□ -2.02
UPF3BQ9BZI7 MIR1264-201ENST00000616374 69 ntBASIC2.44□□□□□ -2.02
UPF3BQ9BZI7 AL356266.1-201ENST00000623311 483 ntBASIC2.44□□□□□ -2.02
UPF3BQ9BZI7 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.44□□□□□ -2.02
UPF3BQ9BZI7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
UPF3BQ9BZI7 SGO1P1-201ENST00000603525 1447 ntBASIC2.43□□□□□ -2.02
UPF3BQ9BZI7 MTND5P29-201ENST00000458676 1807 ntBASIC2.43□□□□□ -2.02
UPF3BQ9BZI7 RNU6-461P-201ENST00000364195 107 ntBASIC2.43□□□□□ -2.02
UPF3BQ9BZI7 RNA5SP138-201ENST00000365098 114 ntBASIC2.43□□□□□ -2.02
UPF3BQ9BZI7 MIR16-1-201ENST00000385271 89 ntBASIC2.43□□□□□ -2.02
UPF3BQ9BZI7 RN7SKP32-201ENST00000410167 303 ntBASIC2.43□□□□□ -2.02
UPF3BQ9BZI7 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.43□□□□□ -2.02
UPF3BQ9BZI7 RPL31P54-201ENST00000429803 370 ntBASIC2.43□□□□□ -2.02
UPF3BQ9BZI7 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
UPF3BQ9BZI7 AC007000.2-201ENST00000442564 487 ntBASIC2.43□□□□□ -2.02
UPF3BQ9BZI7 AC124916.1-201ENST00000444020 547 ntBASIC2.43□□□□□ -2.02
UPF3BQ9BZI7 MTND2P6-201ENST00000455337 1030 ntBASIC2.43□□□□□ -2.02
UPF3BQ9BZI7 RN7SKP210-201ENST00000459176 261 ntBASIC2.43□□□□□ -2.02
UPF3BQ9BZI7 RNU6-551P-201ENST00000516661 103 ntBASIC2.43□□□□□ -2.02
UPF3BQ9BZI7 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.43□□□□□ -2.02
UPF3BQ9BZI7 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.43□□□□□ -2.02
UPF3BQ9BZI7 AC009314.1-201ENST00000603871 304 ntBASIC2.43□□□□□ -2.02
UPF3BQ9BZI7 MTND4P35-201ENST00000604257 1375 ntBASIC2.43□□□□□ -2.02
UPF3BQ9BZI7 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
UPF3BQ9BZI7 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
UPF3BQ9BZI7 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
UPF3BQ9BZI7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
UPF3BQ9BZI7 Y_RNA.40-201ENST00000362645 93 ntBASIC2.42□□□□□ -2.02
UPF3BQ9BZI7 RNU6-251P-201ENST00000363235 104 ntBASIC2.42□□□□□ -2.02
UPF3BQ9BZI7 RNU6-115P-201ENST00000364310 107 ntBASIC2.42□□□□□ -2.02
UPF3BQ9BZI7 SNORA51.6-201ENST00000384151 125 ntBASIC2.42□□□□□ -2.02
UPF3BQ9BZI7 SNORA51.11-201ENST00000384442 131 ntBASIC2.42□□□□□ -2.02
UPF3BQ9BZI7 HMGB3P2-201ENST00000411913 584 ntBASIC2.42□□□□□ -2.02
UPF3BQ9BZI7 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.42□□□□□ -2.02
UPF3BQ9BZI7 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.42□□□□□ -2.02
UPF3BQ9BZI7 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
UPF3BQ9BZI7 TPTE2P1-204ENST00000435256 593 ntBASIC2.42□□□□□ -2.02
UPF3BQ9BZI7 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
UPF3BQ9BZI7 Z82190.1-201ENST00000454534 490 ntBASIC2.42□□□□□ -2.02
UPF3BQ9BZI7 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.42□□□□□ -2.02
UPF3BQ9BZI7 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
UPF3BQ9BZI7 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
UPF3BQ9BZI7 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
UPF3BQ9BZI7 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
UPF3BQ9BZI7 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
UPF3BQ9BZI7 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
UPF3BQ9BZI7 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.42□□□□□ -2.02
UPF3BQ9BZI7 AC090616.3-201ENST00000582184 217 ntBASIC2.42□□□□□ -2.02
UPF3BQ9BZI7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.42□□□□□ -2.02
UPF3BQ9BZI7 OR1M4P-201ENST00000589199 287 ntBASIC2.42□□□□□ -2.02
UPF3BQ9BZI7 AC011494.1-201ENST00000596454 237 ntBASIC2.42□□□□□ -2.02
UPF3BQ9BZI7 AC013444.2-201ENST00000603317 787 ntBASIC2.42□□□□□ -2.02
UPF3BQ9BZI7 AC079395.3-201ENST00000615161 484 ntBASIC2.42□□□□□ -2.02
UPF3BQ9BZI7 AL163051.2-201ENST00000618976 735 ntBASIC2.42□□□□□ -2.02
UPF3BQ9BZI7 UCA1.1-201ENST00000620952 75 ntBASIC2.42□□□□□ -2.02
UPF3BQ9BZI7 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
UPF3BQ9BZI7 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
UPF3BQ9BZI7 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
UPF3BQ9BZI7 RNA5SP88-201ENST00000365560 109 ntBASIC2.41□□□□□ -2.02
UPF3BQ9BZI7 Y_RNA.466-201ENST00000384294 113 ntBASIC2.41□□□□□ -2.02
UPF3BQ9BZI7 TMSB4XP8-201ENST00000402089 135 ntBASIC2.41□□□□□ -2.02
UPF3BQ9BZI7 TMSB4XP6-201ENST00000415187 135 ntBASIC2.41□□□□□ -2.02
UPF3BQ9BZI7 TMSB4XP1-201ENST00000424567 135 ntBASIC2.41□□□□□ -2.02
UPF3BQ9BZI7 AC098614.2-201ENST00000426040 255 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms