Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 RPS3AP43-201ENST00000479743 781 ntBASIC4.15□□□□□ -1.75
CHMP4AQ9BY43 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.15□□□□□ -1.75
CHMP4AQ9BY43 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.15□□□□□ -1.75
CHMP4AQ9BY43 AC007115.1-201ENST00000546853 234 ntBASIC4.15□□□□□ -1.75
CHMP4AQ9BY43 AL049838.1-201ENST00000563647 981 ntBASIC4.15□□□□□ -1.75
CHMP4AQ9BY43 AC011458.1-201ENST00000604034 617 ntBASIC4.15□□□□□ -1.75
CHMP4AQ9BY43 AL442067.2-201ENST00000614033 363 ntBASIC4.15□□□□□ -1.75
CHMP4AQ9BY43 MIR3651-201ENST00000630427 90 ntBASIC4.15□□□□□ -1.75
CHMP4AQ9BY43 AC010329.5-201ENST00000623497 2174 ntBASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 RNU1-75P-201ENST00000347264 129 ntBASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 U8.9-201ENST00000365667 134 ntBASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 RNA5SP229-201ENST00000410809 99 ntBASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 PIGPP2-201ENST00000411569 458 ntBASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 NDUFB4P5-201ENST00000415445 361 ntBASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 ELOCP14-201ENST00000428070 331 ntBASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 ELOCP7-201ENST00000439968 331 ntBASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 AC098831.1-201ENST00000440661 216 ntBASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 AC006539.3-201ENST00000454258 129 ntBASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 AC128713.1-201ENST00000471495 306 ntBASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 SUMO2P6-201ENST00000505273 288 ntBASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 TPT1P8-201ENST00000510120 555 ntBASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 RPPH1-2P-201ENST00000516688 293 ntBASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 RMST_8.1-201ENST00000610287 165 ntBASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 AP001002.2-201ENST00000625137 386 ntBASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 AC103706.2-201ENST00000638080 240 ntBASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC4.14□□□□□ -1.75
CHMP4AQ9BY43 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CHMP4AQ9BY43 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CHMP4AQ9BY43 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHMP4AQ9BY43 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHMP4AQ9BY43 RNU1-70P-201ENST00000362618 164 ntBASIC4.13□□□□□ -1.75
CHMP4AQ9BY43 RNU5A-8P-201ENST00000364102 114 ntBASIC4.13□□□□□ -1.75
CHMP4AQ9BY43 RNA5SP387-201ENST00000364226 106 ntBASIC4.13□□□□□ -1.75
CHMP4AQ9BY43 SNORA7.4-201ENST00000384249 137 ntBASIC4.13□□□□□ -1.75
CHMP4AQ9BY43 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.13□□□□□ -1.75
CHMP4AQ9BY43 HMGB1P27-201ENST00000431429 603 ntBASIC4.13□□□□□ -1.75
CHMP4AQ9BY43 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.13□□□□□ -1.75
CHMP4AQ9BY43 AC005094.1-201ENST00000440420 368 ntBASIC4.13□□□□□ -1.75
CHMP4AQ9BY43 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.13□□□□□ -1.75
CHMP4AQ9BY43 BX510359.1-201ENST00000456973 237 ntBASIC4.13□□□□□ -1.75
CHMP4AQ9BY43 AC026427.2-201ENST00000506228 536 ntBASIC4.13□□□□□ -1.75
CHMP4AQ9BY43 AC034244.1-201ENST00000507687 207 ntBASIC4.13□□□□□ -1.75
CHMP4AQ9BY43 MIR2276-201ENST00000516886 89 ntBASIC4.13□□□□□ -1.75
CHMP4AQ9BY43 COX6CP5-201ENST00000527162 228 ntBASIC4.13□□□□□ -1.75
CHMP4AQ9BY43 MTATP6P15-201ENST00000527233 835 ntBASIC4.13□□□□□ -1.75
CHMP4AQ9BY43 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.13□□□□□ -1.75
CHMP4AQ9BY43 GLYCAM1-201ENST00000546596 285 ntBASIC4.13□□□□□ -1.75
CHMP4AQ9BY43 MIR2682-201ENST00000580305 110 ntBASIC4.13□□□□□ -1.75
CHMP4AQ9BY43 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.13□□□□□ -1.75
CHMP4AQ9BY43 MIR8057-201ENST00000620957 69 ntBASIC4.13□□□□□ -1.75
CHMP4AQ9BY43 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.13□□□□□ -1.75
CHMP4AQ9BY43 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.13□□□□□ -1.75
CHMP4AQ9BY43 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHMP4AQ9BY43 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CHMP4AQ9BY43 MIR30E-201ENST00000362104 92 ntBASIC4.12□□□□□ -1.75
CHMP4AQ9BY43 SNORA9-201ENST00000384215 133 ntBASIC4.12□□□□□ -1.75
CHMP4AQ9BY43 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CHMP4AQ9BY43 AL122016.1-201ENST00000403365 367 ntBASIC4.12□□□□□ -1.75
CHMP4AQ9BY43 AL359634.1-202ENST00000404721 284 ntBASIC4.12□□□□□ -1.75
CHMP4AQ9BY43 ZNF90P2-204ENST00000419323 1075 ntBASIC4.12□□□□□ -1.75
CHMP4AQ9BY43 RPL7P37-201ENST00000425095 738 ntBASIC4.12□□□□□ -1.75
CHMP4AQ9BY43 AL512649.1-201ENST00000428997 581 ntBASIC4.12□□□□□ -1.75
CHMP4AQ9BY43 MTND1P32-201ENST00000433043 938 ntBASIC4.12□□□□□ -1.75
CHMP4AQ9BY43 OSTCP8-201ENST00000445117 448 ntBASIC4.12□□□□□ -1.75
CHMP4AQ9BY43 RN7SL863P-201ENST00000462370 296 ntBASIC4.12□□□□□ -1.75
CHMP4AQ9BY43 NDUFB9P3-201ENST00000521269 501 ntBASIC4.12□□□□□ -1.75
CHMP4AQ9BY43 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.12□□□□□ -1.75
CHMP4AQ9BY43 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.12□□□□□ -1.75
CHMP4AQ9BY43 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.12□□□□□ -1.75
CHMP4AQ9BY43 RPL21P12-201ENST00000559810 515 ntBASIC4.12□□□□□ -1.75
CHMP4AQ9BY43 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.12□□□□□ -1.75
CHMP4AQ9BY43 HMGN2P15-201ENST00000585707 270 ntBASIC4.12□□□□□ -1.75
CHMP4AQ9BY43 AC011471.1-201ENST00000585766 187 ntBASIC4.12□□□□□ -1.75
CHMP4AQ9BY43 AC025594.3-201ENST00000613068 790 ntBASIC4.12□□□□□ -1.75
CHMP4AQ9BY43 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.12□□□□□ -1.75
CHMP4AQ9BY43 AC007998.5-201ENST00000622938 237 ntBASIC4.12□□□□□ -1.75
CHMP4AQ9BY43 AC018692.3-201ENST00000623929 123 ntBASIC4.12□□□□□ -1.75
CHMP4AQ9BY43 MIR7153-201ENST00000637758 57 ntBASIC4.12□□□□□ -1.75
CHMP4AQ9BY43 AC092125.1-201ENST00000562568 1995 ntBASIC4.12□□□□□ -1.75
CHMP4AQ9BY43 AC110491.1-201ENST00000562191 2010 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms