Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
VPS25Q9BRG1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
VPS25Q9BRG1 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
VPS25Q9BRG1 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
VPS25Q9BRG1 RNVU1-14-201ENST00000384770 164 ntBASIC1.29□□□□□ -2.2
VPS25Q9BRG1 MIR196B-201ENST00000384852 84 ntBASIC1.29□□□□□ -2.2
VPS25Q9BRG1 MIR937-201ENST00000401271 86 ntBASIC1.29□□□□□ -2.2
VPS25Q9BRG1 NDUFS5P1-201ENST00000405668 289 ntBASIC1.29□□□□□ -2.2
VPS25Q9BRG1 AL355615.1-201ENST00000406187 641 ntBASIC1.29□□□□□ -2.2
VPS25Q9BRG1 NANOGP5-201ENST00000424456 877 ntBASIC1.29□□□□□ -2.2
VPS25Q9BRG1 AC092047.1-201ENST00000424997 240 ntBASIC1.29□□□□□ -2.2
VPS25Q9BRG1 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC1.29□□□□□ -2.2
VPS25Q9BRG1 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.29□□□□□ -2.2
VPS25Q9BRG1 USP9YP8-201ENST00000441913 500 ntBASIC1.29□□□□□ -2.2
VPS25Q9BRG1 PIGFP3-201ENST00000441918 722 ntBASIC1.29□□□□□ -2.2
VPS25Q9BRG1 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
VPS25Q9BRG1 AC234781.5-201ENST00000508429 271 ntBASIC1.29□□□□□ -2.2
VPS25Q9BRG1 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.29□□□□□ -2.2
VPS25Q9BRG1 AC074250.1-201ENST00000511117 192 ntBASIC1.29□□□□□ -2.2
VPS25Q9BRG1 AC093752.1-206ENST00000511823 336 ntBASIC1.29□□□□□ -2.2
VPS25Q9BRG1 HIGD1AP6-201ENST00000521833 279 ntBASIC1.29□□□□□ -2.2
VPS25Q9BRG1 AC107953.1-201ENST00000522216 297 ntBASIC1.29□□□□□ -2.2
VPS25Q9BRG1 AP002748.2-201ENST00000528671 348 ntBASIC1.29□□□□□ -2.2
VPS25Q9BRG1 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
VPS25Q9BRG1 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.29□□□□□ -2.2
VPS25Q9BRG1 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC1.29□□□□□ -2.2
VPS25Q9BRG1 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC1.29□□□□□ -2.2
VPS25Q9BRG1 LSM6P2-201ENST00000552208 177 ntBASIC1.29□□□□□ -2.2
VPS25Q9BRG1 AL160236.1-201ENST00000556317 195 ntBASIC1.29□□□□□ -2.2
VPS25Q9BRG1 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.29□□□□□ -2.2
VPS25Q9BRG1 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.29□□□□□ -2.2
VPS25Q9BRG1 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.29□□□□□ -2.2
VPS25Q9BRG1 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC1.29□□□□□ -2.2
VPS25Q9BRG1 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.29□□□□□ -2.2
VPS25Q9BRG1 AC018618.2-201ENST00000604770 446 ntBASIC1.29□□□□□ -2.2
VPS25Q9BRG1 AL442067.2-201ENST00000614033 363 ntBASIC1.29□□□□□ -2.2
VPS25Q9BRG1 AC009831.4-201ENST00000620744 325 ntBASIC1.29□□□□□ -2.2
VPS25Q9BRG1 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
VPS25Q9BRG1 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.28□□□□□ -2.2
VPS25Q9BRG1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
VPS25Q9BRG1 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
VPS25Q9BRG1 RNA5SP479-201ENST00000364858 117 ntBASIC1.28□□□□□ -2.2
VPS25Q9BRG1 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC1.28□□□□□ -2.2
VPS25Q9BRG1 RNU6-217P-201ENST00000384164 104 ntBASIC1.28□□□□□ -2.2
VPS25Q9BRG1 MIR221-201ENST00000385135 110 ntBASIC1.28□□□□□ -2.2
VPS25Q9BRG1 SNORA48.3-201ENST00000391081 134 ntBASIC1.28□□□□□ -2.2
VPS25Q9BRG1 AL360182.1-201ENST00000397433 468 ntBASIC1.28□□□□□ -2.2
VPS25Q9BRG1 RNU2-52P-201ENST00000410680 190 ntBASIC1.28□□□□□ -2.2
VPS25Q9BRG1 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.28□□□□□ -2.2
VPS25Q9BRG1 USP9YP6-201ENST00000413550 854 ntBASIC1.28□□□□□ -2.2
VPS25Q9BRG1 AL357078.2-201ENST00000416486 427 ntBASIC1.28□□□□□ -2.2
VPS25Q9BRG1 UBE2FP1-201ENST00000416536 447 ntBASIC1.28□□□□□ -2.2
VPS25Q9BRG1 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC1.28□□□□□ -2.2
VPS25Q9BRG1 AC009237.2-201ENST00000421358 284 ntBASIC1.28□□□□□ -2.2
VPS25Q9BRG1 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.28□□□□□ -2.2
VPS25Q9BRG1 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC1.28□□□□□ -2.2
VPS25Q9BRG1 SDAD1P3-201ENST00000427380 333 ntBASIC1.28□□□□□ -2.2
VPS25Q9BRG1 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.28□□□□□ -2.2
VPS25Q9BRG1 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.28□□□□□ -2.2
VPS25Q9BRG1 AC105272.1-201ENST00000438604 198 ntBASIC1.28□□□□□ -2.2
VPS25Q9BRG1 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC1.28□□□□□ -2.2
VPS25Q9BRG1 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.28□□□□□ -2.2
VPS25Q9BRG1 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.28□□□□□ -2.2
VPS25Q9BRG1 HSPE1P24-201ENST00000450782 238 ntBASIC1.28□□□□□ -2.2
VPS25Q9BRG1 DNAJC19P8-201ENST00000452887 259 ntBASIC1.28□□□□□ -2.2
VPS25Q9BRG1 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.28□□□□□ -2.2
VPS25Q9BRG1 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.28□□□□□ -2.2
VPS25Q9BRG1 AC103987.1-201ENST00000473394 348 ntBASIC1.28□□□□□ -2.2
VPS25Q9BRG1 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC1.28□□□□□ -2.2
VPS25Q9BRG1 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.28□□□□□ -2.2
VPS25Q9BRG1 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.28□□□□□ -2.2
VPS25Q9BRG1 AC074050.1-201ENST00000563247 211 ntBASIC1.28□□□□□ -2.2
VPS25Q9BRG1 AL022067.1-201ENST00000602426 454 ntBASIC1.28□□□□□ -2.2
VPS25Q9BRG1 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.28□□□□□ -2.2
VPS25Q9BRG1 AP000403.1-201ENST00000603349 851 ntBASIC1.28□□□□□ -2.2
VPS25Q9BRG1 AC046143.2-201ENST00000609789 160 ntBASIC1.28□□□□□ -2.2
VPS25Q9BRG1 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.28□□□□□ -2.2
VPS25Q9BRG1 AC011330.2-201ENST00000621680 635 ntBASIC1.28□□□□□ -2.2
VPS25Q9BRG1 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.28□□□□□ -2.2
VPS25Q9BRG1 AC098679.5-201ENST00000624394 571 ntBASIC1.28□□□□□ -2.2
VPS25Q9BRG1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.28□□□□□ -2.2
VPS25Q9BRG1 AC093591.3-201ENST00000634516 308 ntBASIC1.28□□□□□ -2.2
VPS25Q9BRG1 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC1.28□□□□□ -2.2
VPS25Q9BRG1 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.28□□□□□ -2.2
VPS25Q9BRG1 AL161722.3-201ENST00000605789 2983 ntBASIC1.27□□□□□ -2.21
VPS25Q9BRG1 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.27□□□□□ -2.21
VPS25Q9BRG1 AL355596.1-201ENST00000565399 3996 ntBASIC1.27□□□□□ -2.21
VPS25Q9BRG1 MIR7-3-201ENST00000384898 110 ntBASIC1.27□□□□□ -2.21
VPS25Q9BRG1 ATF1P1-201ENST00000406040 927 ntBASIC1.27□□□□□ -2.21
VPS25Q9BRG1 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.27□□□□□ -2.21
VPS25Q9BRG1 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.27□□□□□ -2.21
VPS25Q9BRG1 RPL26P6-201ENST00000440913 438 ntBASIC1.27□□□□□ -2.21
VPS25Q9BRG1 BNIP3P2-201ENST00000441221 577 ntBASIC1.27□□□□□ -2.21
VPS25Q9BRG1 AC118469.1-201ENST00000442943 488 ntBASIC1.27□□□□□ -2.21
VPS25Q9BRG1 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
VPS25Q9BRG1 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.27□□□□□ -2.21
VPS25Q9BRG1 AP1S2P1-201ENST00000457344 379 ntBASIC1.27□□□□□ -2.21
VPS25Q9BRG1 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.27□□□□□ -2.21
VPS25Q9BRG1 HMGB1P35-201ENST00000503360 598 ntBASIC1.27□□□□□ -2.21
VPS25Q9BRG1 AC114801.2-201ENST00000503825 781 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms