Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.66□□□□□ -1.98
NPAS2Q99743 BX119904.4-201ENST00000424402 301 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.66□□□□□ -1.98
NPAS2Q99743 SNRPEP7-201ENST00000438350 220 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 AC105272.1-201ENST00000438604 198 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 AC004854.1-201ENST00000440356 349 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 AL049734.2-201ENST00000441066 616 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
NPAS2Q99743 MTND1P31-201ENST00000449206 961 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 AL009048.1-201ENST00000450437 298 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 NIPA2P5-201ENST00000452282 464 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 AC092155.2-201ENST00000454675 477 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 USP9YP10-201ENST00000454868 628 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 MTND1P16-201ENST00000465177 898 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 AC008571.1-201ENST00000467232 300 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 RPS20P22-201ENST00000473700 357 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 AC004924.1-201ENST00000480160 781 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 AC233702.1-201ENST00000482905 502 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 LARP1BP2-201ENST00000486594 519 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 UBE2V1P12-201ENST00000503954 474 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.66□□□□□ -1.98
NPAS2Q99743 OR5BM1P-201ENST00000512021 366 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 AC024589.1-201ENST00000512207 263 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 AC109445.1-201ENST00000512356 383 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 TBCAP3-201ENST00000512475 312 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 RNU6-840P-201ENST00000517275 65 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.66□□□□□ -1.98
NPAS2Q99743 HSPE1P20-201ENST00000538133 289 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.66□□□□□ -1.98
NPAS2Q99743 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.66□□□□□ -1.98
NPAS2Q99743 MIR4509-3-201ENST00000578671 94 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 MIR4509-2-201ENST00000583920 94 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 VN1R90P-201ENST00000595717 726 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 AC024153.1-201ENST00000603103 365 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 AL160237.3-201ENST00000604114 1013 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 AP000787.2-201ENST00000604432 568 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 AC093838.1-201ENST00000613014 469 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 AC016597.2-201ENST00000613256 341 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 MIR4509-1-201ENST00000618224 94 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
NPAS2Q99743 AC006378.2-201ENST00000623178 2476 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 DDX10P1-201ENST00000448545 1933 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
NPAS2Q99743 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
NPAS2Q99743 ZNF29P-201ENST00000225587 168 ntBASIC2.65□□□□□ -1.99
NPAS2Q99743 MIR26A1-201ENST00000362205 77 ntBASIC2.65□□□□□ -1.99
NPAS2Q99743 MIR592-201ENST00000384959 97 ntBASIC2.65□□□□□ -1.99
NPAS2Q99743 RNU6-754P-201ENST00000391166 107 ntBASIC2.65□□□□□ -1.99
NPAS2Q99743 RPL21P75-201ENST00000396599 483 ntBASIC2.65□□□□□ -1.99
NPAS2Q99743 RPL21P28-201ENST00000401418 483 ntBASIC2.65□□□□□ -1.99
NPAS2Q99743 AL356421.1-201ENST00000403255 413 ntBASIC2.65□□□□□ -1.99
NPAS2Q99743 AL592114.1-201ENST00000403842 483 ntBASIC2.65□□□□□ -1.99
NPAS2Q99743 MTATP6P20-201ENST00000414147 562 ntBASIC2.65□□□□□ -1.99
NPAS2Q99743 AL513175.2-201ENST00000422071 443 ntBASIC2.65□□□□□ -1.99
NPAS2Q99743 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.65□□□□□ -1.99
NPAS2Q99743 AC009414.1-201ENST00000427200 443 ntBASIC2.65□□□□□ -1.99
NPAS2Q99743 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.65□□□□□ -1.99
NPAS2Q99743 OR10R1P-201ENST00000441524 1141 ntBASIC2.65□□□□□ -1.99
NPAS2Q99743 MTCYBP3-201ENST00000445588 1137 ntBASIC2.65□□□□□ -1.99
NPAS2Q99743 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.65□□□□□ -1.99
NPAS2Q99743 ST13P20-201ENST00000447996 1065 ntBASIC2.65□□□□□ -1.99
NPAS2Q99743 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.65□□□□□ -1.99
NPAS2Q99743 AP000705.1-201ENST00000454567 350 ntBASIC2.65□□□□□ -1.99
NPAS2Q99743 ATG12P2-201ENST00000456830 416 ntBASIC2.65□□□□□ -1.99
NPAS2Q99743 RPL21P39-201ENST00000463605 483 ntBASIC2.65□□□□□ -1.99
NPAS2Q99743 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.65□□□□□ -1.99
NPAS2Q99743 RPL21P93-201ENST00000480465 489 ntBASIC2.65□□□□□ -1.99
NPAS2Q99743 AC087190.1-201ENST00000484462 480 ntBASIC2.65□□□□□ -1.99
NPAS2Q99743 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.65□□□□□ -1.99
NPAS2Q99743 AC093591.1-201ENST00000491435 481 ntBASIC2.65□□□□□ -1.99
NPAS2Q99743 RPL21P16-201ENST00000495531 483 ntBASIC2.65□□□□□ -1.99
NPAS2Q99743 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.65□□□□□ -1.99
NPAS2Q99743 SEM1P1-201ENST00000506694 209 ntBASIC2.65□□□□□ -1.99
NPAS2Q99743 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.65□□□□□ -1.99
NPAS2Q99743 RNU6-826P-201ENST00000516827 104 ntBASIC2.65□□□□□ -1.99
NPAS2Q99743 RNA5SP291-201ENST00000517222 105 ntBASIC2.65□□□□□ -1.99
NPAS2Q99743 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
NPAS2Q99743 HMGN1P28-201ENST00000521340 364 ntBASIC2.65□□□□□ -1.99
NPAS2Q99743 SUB1P1-201ENST00000524415 382 ntBASIC2.65□□□□□ -1.99
NPAS2Q99743 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
NPAS2Q99743 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.65□□□□□ -1.99
NPAS2Q99743 MIR4672-201ENST00000583126 81 ntBASIC2.65□□□□□ -1.99
NPAS2Q99743 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.65□□□□□ -1.99
NPAS2Q99743 CR848007.1-201ENST00000442354 1699 ntBASIC2.65□□□□□ -1.99
NPAS2Q99743 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
NPAS2Q99743 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
NPAS2Q99743 AC106754.1-201ENST00000562632 1513 ntBASIC2.64□□□□□ -1.99
NPAS2Q99743 SNORA23-201ENST00000365128 182 ntBASIC2.64□□□□□ -1.99
NPAS2Q99743 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
NPAS2Q99743 ERHP2-201ENST00000402323 299 ntBASIC2.64□□□□□ -1.99
NPAS2Q99743 AL136310.1-201ENST00000404926 654 ntBASIC2.64□□□□□ -1.99
NPAS2Q99743 RPS24P13-201ENST00000442520 397 ntBASIC2.64□□□□□ -1.99
NPAS2Q99743 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.64□□□□□ -1.99
NPAS2Q99743 WASF1P1-201ENST00000447560 1131 ntBASIC2.64□□□□□ -1.99
NPAS2Q99743 AC108938.1-201ENST00000451204 136 ntBASIC2.64□□□□□ -1.99
NPAS2Q99743 AP1S2P1-201ENST00000457344 379 ntBASIC2.64□□□□□ -1.99
NPAS2Q99743 NRON-201ENST00000517270 370 ntBASIC2.64□□□□□ -1.99
NPAS2Q99743 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.64□□□□□ -1.99
NPAS2Q99743 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms