Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1□□□□□ -2.25
COL12A1Q99715 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1□□□□□ -2.25
COL12A1Q99715 OR5AQ1P-201ENST00000527596 927 ntBASIC1□□□□□ -2.25
COL12A1Q99715 AC009127.3-201ENST00000570531 403 ntBASIC1□□□□□ -2.25
COL12A1Q99715 AC005498.1-201ENST00000592125 465 ntBASIC1□□□□□ -2.25
COL12A1Q99715 AC009229.3-201ENST00000608056 282 ntBASIC1□□□□□ -2.25
COL12A1Q99715 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1□□□□□ -2.25
COL12A1Q99715 SNRPEP3-201ENST00000338402 276 ntBASIC1□□□□□ -2.25
COL12A1Q99715 SEM1P1-201ENST00000506694 209 ntBASIC1□□□□□ -2.25
COL12A1Q99715 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1□□□□□ -2.25
COL12A1Q99715 AC068446.3-201ENST00000555285 382 ntBASIC1□□□□□ -2.25
COL12A1Q99715 ZNF192P1-203ENST00000565888 810 ntBASIC1□□□□□ -2.25
COL12A1Q99715 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1□□□□□ -2.25
COL12A1Q99715 AC083899.3-201ENST00000603413 594 ntBASIC1□□□□□ -2.25
COL12A1Q99715 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1□□□□□ -2.25
COL12A1Q99715 MIR8087-201ENST00000612745 78 ntBASIC1□□□□□ -2.25
COL12A1Q99715 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1□□□□□ -2.25
COL12A1Q99715 AC007098.1-201ENST00000420122 367 ntBASIC1□□□□□ -2.25
COL12A1Q99715 RPL7P34-201ENST00000433316 712 ntBASIC1□□□□□ -2.25
COL12A1Q99715 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1□□□□□ -2.25
COL12A1Q99715 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC1□□□□□ -2.25
COL12A1Q99715 AC068338.1-201ENST00000565567 176 ntBASIC1□□□□□ -2.25
COL12A1Q99715 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1□□□□□ -2.25
COL12A1Q99715 GAS5-AS1-201ENST00000602767 694 ntBASIC1□□□□□ -2.25
COL12A1Q99715 AC006270.3-201ENST00000605967 1036 ntBASIC1□□□□□ -2.25
COL12A1Q99715 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC0.99□□□□□ -2.25
COL12A1Q99715 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
COL12A1Q99715 Y_RNA.136-201ENST00000363444 102 ntBASIC0.99□□□□□ -2.25
COL12A1Q99715 RNU6-105P-201ENST00000363909 104 ntBASIC0.99□□□□□ -2.25
COL12A1Q99715 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.99□□□□□ -2.25
COL12A1Q99715 RPS15AP34-201ENST00000487776 387 ntBASIC0.99□□□□□ -2.25
COL12A1Q99715 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.99□□□□□ -2.25
COL12A1Q99715 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.99□□□□□ -2.25
COL12A1Q99715 PABPC1P7-201ENST00000413177 1513 ntBASIC0.99□□□□□ -2.25
COL12A1Q99715 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
COL12A1Q99715 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
COL12A1Q99715 MIR532-201ENST00000385025 91 ntBASIC0.99□□□□□ -2.25
COL12A1Q99715 SUMO1P4-201ENST00000429430 302 ntBASIC0.99□□□□□ -2.25
COL12A1Q99715 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC0.99□□□□□ -2.25
COL12A1Q99715 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC0.99□□□□□ -2.25
COL12A1Q99715 AC092451.1-201ENST00000480211 153 ntBASIC0.99□□□□□ -2.25
COL12A1Q99715 AC090096.1-201ENST00000489168 390 ntBASIC0.99□□□□□ -2.25
COL12A1Q99715 AC103833.1-201ENST00000517442 172 ntBASIC0.99□□□□□ -2.25
COL12A1Q99715 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC0.99□□□□□ -2.25
COL12A1Q99715 AC005156.1-201ENST00000613371 573 ntBASIC0.99□□□□□ -2.25
COL12A1Q99715 XIST_intron.1-201ENST00000619444 68 ntBASIC0.99□□□□□ -2.25
COL12A1Q99715 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
COL12A1Q99715 AC130650.2-201ENST00000618736 2403 ntBASIC0.98□□□□□ -2.25
COL12A1Q99715 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
COL12A1Q99715 MIR591-201ENST00000385290 95 ntBASIC0.98□□□□□ -2.25
COL12A1Q99715 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC0.98□□□□□ -2.25
COL12A1Q99715 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.98□□□□□ -2.25
COL12A1Q99715 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
COL12A1Q99715 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC0.98□□□□□ -2.25
COL12A1Q99715 AC004941.2-201ENST00000427009 228 ntBASIC0.98□□□□□ -2.25
COL12A1Q99715 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.98□□□□□ -2.25
COL12A1Q99715 AC048347.1-201ENST00000624621 427 ntBASIC0.98□□□□□ -2.25
COL12A1Q99715 AC090517.3-201ENST00000625170 141 ntBASIC0.98□□□□□ -2.25
COL12A1Q99715 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC0.98□□□□□ -2.25
COL12A1Q99715 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
COL12A1Q99715 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
COL12A1Q99715 RNA5SP331-201ENST00000364986 107 ntBASIC0.97□□□□□ -2.25
COL12A1Q99715 RNU4-52P-201ENST00000384209 138 ntBASIC0.97□□□□□ -2.25
COL12A1Q99715 MOB4-205ENST00000409916 829 ntTSL 3 BASIC0.97□□□□□ -2.25
COL12A1Q99715 RPL30P4-201ENST00000429309 333 ntBASIC0.97□□□□□ -2.25
COL12A1Q99715 PSMA2P3-201ENST00000429685 675 ntBASIC0.97□□□□□ -2.25
COL12A1Q99715 MTCO1P30-201ENST00000515244 580 ntBASIC0.97□□□□□ -2.25
COL12A1Q99715 SNORD116-26-201ENST00000516006 96 ntBASIC0.97□□□□□ -2.25
COL12A1Q99715 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.97□□□□□ -2.25
COL12A1Q99715 AL135786.2-201ENST00000608422 615 ntBASIC0.97□□□□□ -2.25
COL12A1Q99715 AC090617.7-201ENST00000623952 126 ntBASIC0.97□□□□□ -2.25
COL12A1Q99715 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC0.97□□□□□ -2.25
COL12A1Q99715 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC0.97□□□□□ -2.25
COL12A1Q99715 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC0.97□□□□□ -2.25
COL12A1Q99715 Y_RNA.518-201ENST00000384552 113 ntBASIC0.97□□□□□ -2.25
COL12A1Q99715 HMGB1P49-201ENST00000418882 569 ntBASIC0.97□□□□□ -2.25
COL12A1Q99715 RNU6-56P-201ENST00000516986 93 ntBASIC0.97□□□□□ -2.25
COL12A1Q99715 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.97□□□□□ -2.25
COL12A1Q99715 AC104229.1-201ENST00000561364 255 ntBASIC0.97□□□□□ -2.25
COL12A1Q99715 CD24P2-201ENST00000565486 219 ntBASIC0.97□□□□□ -2.25
COL12A1Q99715 AC233266.2-201ENST00000567067 528 ntBASIC0.97□□□□□ -2.25
COL12A1Q99715 AC024619.4-201ENST00000580924 316 ntBASIC0.97□□□□□ -2.25
COL12A1Q99715 AC007742.2-201ENST00000618226 398 ntBASIC0.97□□□□□ -2.25
COL12A1Q99715 Xist_exon1.1-201ENST00000618930 85 ntBASIC0.97□□□□□ -2.25
COL12A1Q99715 AC116618.1-201ENST00000634617 774 ntBASIC0.97□□□□□ -2.25
COL12A1Q99715 AC123912.3-201ENST00000600907 1367 ntBASIC0.97□□□□□ -2.25
COL12A1Q99715 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
COL12A1Q99715 RNU6-146P-201ENST00000384602 108 ntBASIC0.97□□□□□ -2.25
COL12A1Q99715 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.97□□□□□ -2.25
COL12A1Q99715 UBE2V2P1-201ENST00000434717 398 ntBASIC0.97□□□□□ -2.25
COL12A1Q99715 AL121601.2-201ENST00000438019 707 ntBASIC0.97□□□□□ -2.25
COL12A1Q99715 XKRYP6-201ENST00000440468 1116 ntBASIC0.97□□□□□ -2.25
COL12A1Q99715 XKRYP3-201ENST00000442113 1116 ntBASIC0.97□□□□□ -2.25
COL12A1Q99715 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.97□□□□□ -2.25
COL12A1Q99715 IGLVVI-22-1-201ENST00000521183 211 ntBASIC0.97□□□□□ -2.25
COL12A1Q99715 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.97□□□□□ -2.25
COL12A1Q99715 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
COL12A1Q99715 CUL4AP1-201ENST00000514750 1863 ntBASIC0.96□□□□□ -2.26
COL12A1Q99715 SUMO2P12-201ENST00000405924 140 ntBASIC0.96□□□□□ -2.26
COL12A1Q99715 CST2P1-201ENST00000425770 87 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms