Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 MIR338-201ENST00000636369 67 ntBASIC1.18□□□□□ -2.22
PCNX1Q96RV3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
PCNX1Q96RV3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
PCNX1Q96RV3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.18□□□□□ -2.22
PCNX1Q96RV3 AL512504.1-201ENST00000415494 778 ntBASIC1.18□□□□□ -2.22
PCNX1Q96RV3 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.18□□□□□ -2.22
PCNX1Q96RV3 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.18□□□□□ -2.22
PCNX1Q96RV3 MTND2P2-201ENST00000434633 945 ntBASIC1.18□□□□□ -2.22
PCNX1Q96RV3 AL360221.1-201ENST00000445989 335 ntBASIC1.18□□□□□ -2.22
PCNX1Q96RV3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.18□□□□□ -2.22
PCNX1Q96RV3 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.18□□□□□ -2.22
PCNX1Q96RV3 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.18□□□□□ -2.22
PCNX1Q96RV3 RNU6-113P-201ENST00000516653 101 ntBASIC1.18□□□□□ -2.22
PCNX1Q96RV3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC1.18□□□□□ -2.22
PCNX1Q96RV3 AC121758.2-201ENST00000553271 193 ntBASIC1.18□□□□□ -2.22
PCNX1Q96RV3 DUXAP4-201ENST00000603046 613 ntBASIC1.18□□□□□ -2.22
PCNX1Q96RV3 AP000254.1-201ENST00000609934 520 ntBASIC1.18□□□□□ -2.22
PCNX1Q96RV3 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.18□□□□□ -2.22
PCNX1Q96RV3 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
PCNX1Q96RV3 AC011477.1-204ENST00000623416 1325 ntBASIC1.18□□□□□ -2.22
PCNX1Q96RV3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
PCNX1Q96RV3 AC090740.1-201ENST00000623193 2262 ntBASIC1.17□□□□□ -2.22
PCNX1Q96RV3 RNA5SP331-201ENST00000364986 107 ntBASIC1.17□□□□□ -2.22
PCNX1Q96RV3 SNORA18.2-201ENST00000383865 132 ntBASIC1.17□□□□□ -2.22
PCNX1Q96RV3 Z75741.2-201ENST00000417272 1167 ntBASIC1.17□□□□□ -2.22
PCNX1Q96RV3 RPL27AP8-201ENST00000424277 446 ntBASIC1.17□□□□□ -2.22
PCNX1Q96RV3 HMGN2P13-201ENST00000476476 274 ntBASIC1.17□□□□□ -2.22
PCNX1Q96RV3 RBM43P1-201ENST00000476891 1081 ntBASIC1.17□□□□□ -2.22
PCNX1Q96RV3 MTCO2P9-201ENST00000503214 694 ntBASIC1.17□□□□□ -2.22
PCNX1Q96RV3 CBX3P2-202ENST00000583365 535 ntBASIC1.17□□□□□ -2.22
PCNX1Q96RV3 AC090525.3-201ENST00000605601 189 ntBASIC1.17□□□□□ -2.22
PCNX1Q96RV3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.17□□□□□ -2.22
PCNX1Q96RV3 AC138915.1-201ENST00000565427 1685 ntBASIC1.17□□□□□ -2.22
PCNX1Q96RV3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.17□□□□□ -2.22
PCNX1Q96RV3 RNU4-91P-201ENST00000364778 135 ntBASIC1.17□□□□□ -2.22
PCNX1Q96RV3 SNORD48-201ENST00000364953 64 ntBASIC1.17□□□□□ -2.22
PCNX1Q96RV3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.17□□□□□ -2.22
PCNX1Q96RV3 AIMP1P2-201ENST00000425294 312 ntBASIC1.17□□□□□ -2.22
PCNX1Q96RV3 TRAPPC2P9-201ENST00000434556 343 ntBASIC1.17□□□□□ -2.22
PCNX1Q96RV3 PSPHP1-201ENST00000450062 261 ntBASIC1.17□□□□□ -2.22
PCNX1Q96RV3 HAUS1P1-201ENST00000505275 832 ntBASIC1.17□□□□□ -2.22
PCNX1Q96RV3 AC093281.2-201ENST00000510153 597 ntBASIC1.17□□□□□ -2.22
PCNX1Q96RV3 AC010625.1-201ENST00000511296 403 ntBASIC1.17□□□□□ -2.22
PCNX1Q96RV3 RN7SKP34-201ENST00000516142 244 ntBASIC1.17□□□□□ -2.22
PCNX1Q96RV3 AF279873.1-201ENST00000523393 313 ntBASIC1.17□□□□□ -2.22
PCNX1Q96RV3 HSPE1P4-201ENST00000550617 308 ntBASIC1.17□□□□□ -2.22
PCNX1Q96RV3 AC073413.2-201ENST00000604332 360 ntBASIC1.17□□□□□ -2.22
PCNX1Q96RV3 AL020996.3-201ENST00000606617 222 ntBASIC1.17□□□□□ -2.22
PCNX1Q96RV3 AC007742.2-201ENST00000618226 398 ntBASIC1.17□□□□□ -2.22
PCNX1Q96RV3 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC1.17□□□□□ -2.22
PCNX1Q96RV3 AC010487.4-201ENST00000637027 61 ntBASIC1.17□□□□□ -2.22
PCNX1Q96RV3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
PCNX1Q96RV3 MTND4P31-201ENST00000425607 1343 ntBASIC1.17□□□□□ -2.22
PCNX1Q96RV3 SNORD114-27-201ENST00000363766 70 ntBASIC1.16□□□□□ -2.22
PCNX1Q96RV3 RNU4-52P-201ENST00000384209 138 ntBASIC1.16□□□□□ -2.22
PCNX1Q96RV3 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC1.16□□□□□ -2.22
PCNX1Q96RV3 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.16□□□□□ -2.22
PCNX1Q96RV3 SUMO1P4-201ENST00000429430 302 ntBASIC1.16□□□□□ -2.22
PCNX1Q96RV3 NEFMP1-201ENST00000443423 1006 ntBASIC1.16□□□□□ -2.22
PCNX1Q96RV3 RNU6-1132P-201ENST00000459214 107 ntBASIC1.16□□□□□ -2.22
PCNX1Q96RV3 LRRC34P2-201ENST00000514850 553 ntBASIC1.16□□□□□ -2.22
PCNX1Q96RV3 SNORD59.2-201ENST00000516873 68 ntBASIC1.16□□□□□ -2.22
PCNX1Q96RV3 RNU1-92P-201ENST00000517017 135 ntBASIC1.16□□□□□ -2.22
PCNX1Q96RV3 SNORA31.24-201ENST00000517232 57 ntBASIC1.16□□□□□ -2.22
PCNX1Q96RV3 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
PCNX1Q96RV3 AL449363.1-201ENST00000617815 186 ntBASIC1.16□□□□□ -2.22
PCNX1Q96RV3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
PCNX1Q96RV3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
PCNX1Q96RV3 AC080100.1-201ENST00000624239 5356 ntBASIC1.16□□□□□ -2.22
PCNX1Q96RV3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
PCNX1Q96RV3 Y_RNA.549-201ENST00000384657 102 ntBASIC1.16□□□□□ -2.22
PCNX1Q96RV3 AC016769.3-201ENST00000396562 315 ntBASIC1.16□□□□□ -2.22
PCNX1Q96RV3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.16□□□□□ -2.22
PCNX1Q96RV3 AC004022.1-201ENST00000447766 1066 ntBASIC1.16□□□□□ -2.22
PCNX1Q96RV3 TPRKBP1-201ENST00000456243 481 ntBASIC1.16□□□□□ -2.22
PCNX1Q96RV3 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.16□□□□□ -2.22
PCNX1Q96RV3 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC1.16□□□□□ -2.22
PCNX1Q96RV3 AP000676.4-201ENST00000624659 623 ntBASIC1.16□□□□□ -2.22
PCNX1Q96RV3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.15□□□□□ -2.22
PCNX1Q96RV3 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.15□□□□□ -2.23
PCNX1Q96RV3 AC090774.1-201ENST00000435925 246 ntBASIC1.15□□□□□ -2.23
PCNX1Q96RV3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.15□□□□□ -2.23
PCNX1Q96RV3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.15□□□□□ -2.23
PCNX1Q96RV3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
PCNX1Q96RV3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
PCNX1Q96RV3 AC007115.1-201ENST00000546853 234 ntBASIC1.15□□□□□ -2.23
PCNX1Q96RV3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
PCNX1Q96RV3 MIR320A-201ENST00000385302 82 ntBASIC1.15□□□□□ -2.23
PCNX1Q96RV3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.15□□□□□ -2.23
PCNX1Q96RV3 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.15□□□□□ -2.23
PCNX1Q96RV3 RPL23AP41-201ENST00000484754 458 ntBASIC1.15□□□□□ -2.23
PCNX1Q96RV3 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.15□□□□□ -2.23
PCNX1Q96RV3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.15□□□□□ -2.23
PCNX1Q96RV3 RNA5SP364-201ENST00000516938 78 ntBASIC1.15□□□□□ -2.23
PCNX1Q96RV3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.15□□□□□ -2.23
PCNX1Q96RV3 EEF1B2P4-201ENST00000551398 348 ntBASIC1.15□□□□□ -2.23
PCNX1Q96RV3 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
PCNX1Q96RV3 MTND5P10-201ENST00000603719 1809 ntBASIC1.15□□□□□ -2.23
PCNX1Q96RV3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.14□□□□□ -2.23
PCNX1Q96RV3 AL589743.1-201ENST00000551932 2712 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms