Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 HSPE1P4-201ENST00000550617 308 ntBASIC1□□□□□ -2.25
CSMD1Q96PZ7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
CSMD1Q96PZ7 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1□□□□□ -2.25
CSMD1Q96PZ7 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
CSMD1Q96PZ7 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC0.99□□□□□ -2.25
CSMD1Q96PZ7 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC0.99□□□□□ -2.25
CSMD1Q96PZ7 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC0.99□□□□□ -2.25
CSMD1Q96PZ7 DPPA3P1-201ENST00000448050 469 ntBASIC0.99□□□□□ -2.25
CSMD1Q96PZ7 PTGES3P5-201ENST00000455109 434 ntBASIC0.99□□□□□ -2.25
CSMD1Q96PZ7 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC0.99□□□□□ -2.25
CSMD1Q96PZ7 AL135786.2-201ENST00000608422 615 ntBASIC0.99□□□□□ -2.25
CSMD1Q96PZ7 AC007742.2-201ENST00000618226 398 ntBASIC0.99□□□□□ -2.25
CSMD1Q96PZ7 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
CSMD1Q96PZ7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CSMD1Q96PZ7 EFTUD1P2-201ENST00000514817 1603 ntBASIC0.99□□□□□ -2.25
CSMD1Q96PZ7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
CSMD1Q96PZ7 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
CSMD1Q96PZ7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
CSMD1Q96PZ7 AP005435.4-201ENST00000529514 284 ntBASIC0.99□□□□□ -2.25
CSMD1Q96PZ7 AC006270.2-201ENST00000578523 652 ntBASIC0.99□□□□□ -2.25
CSMD1Q96PZ7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
CSMD1Q96PZ7 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
CSMD1Q96PZ7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC0.99□□□□□ -2.25
CSMD1Q96PZ7 AC074117.2-201ENST00000417130 397 ntBASIC0.98□□□□□ -2.25
CSMD1Q96PZ7 SNRPEP10-201ENST00000420249 274 ntBASIC0.98□□□□□ -2.25
CSMD1Q96PZ7 IFNA20P-201ENST00000436840 528 ntBASIC0.98□□□□□ -2.25
CSMD1Q96PZ7 IPO7P1-201ENST00000442031 636 ntBASIC0.98□□□□□ -2.25
CSMD1Q96PZ7 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.98□□□□□ -2.25
CSMD1Q96PZ7 RPL23AP88-201ENST00000605759 454 ntBASIC0.98□□□□□ -2.25
CSMD1Q96PZ7 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
CSMD1Q96PZ7 CENPCP1-201ENST00000533085 2578 ntBASIC0.98□□□□□ -2.25
CSMD1Q96PZ7 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC0.98□□□□□ -2.25
CSMD1Q96PZ7 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC0.98□□□□□ -2.25
CSMD1Q96PZ7 CR848007.2-201ENST00000424918 787 ntBASIC0.98□□□□□ -2.25
CSMD1Q96PZ7 AP000926.1-201ENST00000479573 241 ntBASIC0.98□□□□□ -2.25
CSMD1Q96PZ7 BNIP3P26-201ENST00000600827 554 ntBASIC0.98□□□□□ -2.25
CSMD1Q96PZ7 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC0.98□□□□□ -2.25
CSMD1Q96PZ7 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.98□□□□□ -2.25
CSMD1Q96PZ7 AC093801.2-201ENST00000503966 1050 ntBASIC0.98□□□□□ -2.25
CSMD1Q96PZ7 AC110792.2-201ENST00000510278 224 ntBASIC0.98□□□□□ -2.25
CSMD1Q96PZ7 AP004607.1-201ENST00000524456 203 ntBASIC0.98□□□□□ -2.25
CSMD1Q96PZ7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC0.98□□□□□ -2.25
CSMD1Q96PZ7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC0.98□□□□□ -2.25
CSMD1Q96PZ7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.98□□□□□ -2.25
CSMD1Q96PZ7 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
CSMD1Q96PZ7 AC109780.2-201ENST00000413467 845 ntBASIC0.97□□□□□ -2.25
CSMD1Q96PZ7 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC0.97□□□□□ -2.25
CSMD1Q96PZ7 IMMP1LP2-201ENST00000552954 492 ntBASIC0.97□□□□□ -2.25
CSMD1Q96PZ7 AC008962.1-201ENST00000605729 304 ntBASIC0.97□□□□□ -2.25
CSMD1Q96PZ7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.97□□□□□ -2.25
CSMD1Q96PZ7 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
CSMD1Q96PZ7 Y_RNA.142-201ENST00000363491 102 ntBASIC0.97□□□□□ -2.25
CSMD1Q96PZ7 RNU1-52P-201ENST00000384190 164 ntBASIC0.97□□□□□ -2.25
CSMD1Q96PZ7 HMGB1P49-201ENST00000418882 569 ntBASIC0.97□□□□□ -2.25
CSMD1Q96PZ7 MTND5P25-201ENST00000430499 799 ntBASIC0.97□□□□□ -2.25
CSMD1Q96PZ7 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC0.97□□□□□ -2.25
CSMD1Q96PZ7 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.97□□□□□ -2.25
CSMD1Q96PZ7 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.97□□□□□ -2.25
CSMD1Q96PZ7 AC011330.2-201ENST00000621680 635 ntBASIC0.97□□□□□ -2.25
CSMD1Q96PZ7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
CSMD1Q96PZ7 AL118496.1-201ENST00000440201 1812 ntBASIC0.97□□□□□ -2.25
CSMD1Q96PZ7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.97□□□□□ -2.25
CSMD1Q96PZ7 AC019070.1-201ENST00000415008 1024 ntBASIC0.97□□□□□ -2.25
CSMD1Q96PZ7 AC109583.1-201ENST00000432156 268 ntBASIC0.97□□□□□ -2.25
CSMD1Q96PZ7 RNA5SP309-201ENST00000516670 106 ntBASIC0.97□□□□□ -2.25
CSMD1Q96PZ7 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC0.97□□□□□ -2.25
CSMD1Q96PZ7 GLUD1P4-201ENST00000590914 418 ntBASIC0.97□□□□□ -2.25
CSMD1Q96PZ7 MIR7974-201ENST00000615835 79 ntBASIC0.97□□□□□ -2.25
CSMD1Q96PZ7 SNORD114-23-201ENST00000363536 72 ntBASIC0.96□□□□□ -2.26
CSMD1Q96PZ7 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.96□□□□□ -2.26
CSMD1Q96PZ7 Z86062.1-201ENST00000406773 777 ntBASIC0.96□□□□□ -2.26
CSMD1Q96PZ7 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC0.96□□□□□ -2.26
CSMD1Q96PZ7 AC004941.2-201ENST00000427009 228 ntBASIC0.96□□□□□ -2.26
CSMD1Q96PZ7 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.96□□□□□ -2.26
CSMD1Q96PZ7 FO393415.2-201ENST00000480085 343 ntBASIC0.96□□□□□ -2.26
CSMD1Q96PZ7 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC0.96□□□□□ -2.26
CSMD1Q96PZ7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.96□□□□□ -2.26
CSMD1Q96PZ7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC0.96□□□□□ -2.26
CSMD1Q96PZ7 OR6K5P-201ENST00000447050 945 ntBASIC0.96□□□□□ -2.26
CSMD1Q96PZ7 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
CSMD1Q96PZ7 AC103833.1-201ENST00000517442 172 ntBASIC0.96□□□□□ -2.26
CSMD1Q96PZ7 AC007115.1-201ENST00000546853 234 ntBASIC0.96□□□□□ -2.26
CSMD1Q96PZ7 AL512605.2-201ENST00000592972 256 ntBASIC0.96□□□□□ -2.26
CSMD1Q96PZ7 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC0.96□□□□□ -2.26
CSMD1Q96PZ7 AC097655.1-201ENST00000635075 318 ntBASIC0.96□□□□□ -2.26
CSMD1Q96PZ7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
CSMD1Q96PZ7 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC0.96□□□□□ -2.26
CSMD1Q96PZ7 RNU4-60P-201ENST00000517239 135 ntBASIC0.96□□□□□ -2.26
CSMD1Q96PZ7 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.96□□□□□ -2.26
CSMD1Q96PZ7 AC104229.1-201ENST00000561364 255 ntBASIC0.96□□□□□ -2.26
CSMD1Q96PZ7 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC0.96□□□□□ -2.26
CSMD1Q96PZ7 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC0.96□□□□□ -2.26
CSMD1Q96PZ7 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
CSMD1Q96PZ7 AC131280.1-202ENST00000624067 4211 ntBASIC0.95□□□□□ -2.26
CSMD1Q96PZ7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CSMD1Q96PZ7 RNA5SP295-201ENST00000362655 121 ntBASIC0.95□□□□□ -2.26
CSMD1Q96PZ7 Y_RNA.132-201ENST00000363421 102 ntBASIC0.95□□□□□ -2.26
CSMD1Q96PZ7 RNY3-201ENST00000365484 102 ntBASIC0.95□□□□□ -2.26
CSMD1Q96PZ7 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CSMD1Q96PZ7 RPL5P19-201ENST00000404228 893 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms