Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
FGD4Q96M96 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
FGD4Q96M96 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
FGD4Q96M96 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.82□□□□□ -1.64
FGD4Q96M96 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.82□□□□□ -1.64
FGD4Q96M96 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
FGD4Q96M96 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
FGD4Q96M96 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
FGD4Q96M96 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
FGD4Q96M96 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
FGD4Q96M96 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.82□□□□□ -1.64
FGD4Q96M96 SNORD113-7-201ENST00000363762 77 ntBASIC4.82□□□□□ -1.64
FGD4Q96M96 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
FGD4Q96M96 MIR135A2-201ENST00000384854 100 ntBASIC4.82□□□□□ -1.64
FGD4Q96M96 MIR195-201ENST00000385194 87 ntBASIC4.82□□□□□ -1.64
FGD4Q96M96 RNU6-550P-201ENST00000391057 101 ntBASIC4.82□□□□□ -1.64
FGD4Q96M96 UBE2V1P2-201ENST00000397758 440 ntBASIC4.82□□□□□ -1.64
FGD4Q96M96 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.82□□□□□ -1.64
FGD4Q96M96 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
FGD4Q96M96 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.82□□□□□ -1.64
FGD4Q96M96 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
FGD4Q96M96 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.82□□□□□ -1.64
FGD4Q96M96 RNA5SP246-201ENST00000458909 119 ntBASIC4.82□□□□□ -1.64
FGD4Q96M96 RPL21P8-201ENST00000465083 535 ntBASIC4.82□□□□□ -1.64
FGD4Q96M96 RPL5P30-201ENST00000465511 891 ntBASIC4.82□□□□□ -1.64
FGD4Q96M96 RPL21P103-201ENST00000479921 488 ntBASIC4.82□□□□□ -1.64
FGD4Q96M96 VN1R105P-201ENST00000486595 910 ntBASIC4.82□□□□□ -1.64
FGD4Q96M96 RPL23AP55-201ENST00000498163 452 ntBASIC4.82□□□□□ -1.64
FGD4Q96M96 TRBVA-201ENST00000498804 316 ntBASIC4.82□□□□□ -1.64
FGD4Q96M96 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.82□□□□□ -1.64
FGD4Q96M96 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
FGD4Q96M96 RNU6-1038P-201ENST00000516516 104 ntBASIC4.82□□□□□ -1.64
FGD4Q96M96 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.82□□□□□ -1.64
FGD4Q96M96 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.82□□□□□ -1.64
FGD4Q96M96 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.82□□□□□ -1.64
FGD4Q96M96 AL352979.3-201ENST00000553515 247 ntBASIC4.82□□□□□ -1.64
FGD4Q96M96 OR11H5P-201ENST00000554039 926 ntBASIC4.82□□□□□ -1.64
FGD4Q96M96 AC068446.3-201ENST00000555285 382 ntBASIC4.82□□□□□ -1.64
FGD4Q96M96 AL121576.1-201ENST00000556055 276 ntBASIC4.82□□□□□ -1.64
FGD4Q96M96 AC020661.2-201ENST00000560114 134 ntBASIC4.82□□□□□ -1.64
FGD4Q96M96 MIR5583-1-201ENST00000580941 59 ntBASIC4.82□□□□□ -1.64
FGD4Q96M96 BNIP3P22-201ENST00000593399 556 ntBASIC4.82□□□□□ -1.64
FGD4Q96M96 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.82□□□□□ -1.64
FGD4Q96M96 MIR4275-201ENST00000636486 87 ntBASIC4.82□□□□□ -1.64
FGD4Q96M96 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
FGD4Q96M96 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.82□□□□□ -1.64
FGD4Q96M96 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
FGD4Q96M96 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
FGD4Q96M96 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
FGD4Q96M96 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
FGD4Q96M96 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
FGD4Q96M96 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
FGD4Q96M96 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.82□□□□□ -1.64
FGD4Q96M96 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
FGD4Q96M96 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
FGD4Q96M96 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.81□□□□□ -1.64
FGD4Q96M96 RNA5SP513-201ENST00000364648 118 ntBASIC4.81□□□□□ -1.64
FGD4Q96M96 SNORD42.2-201ENST00000365570 69 ntBASIC4.81□□□□□ -1.64
FGD4Q96M96 SMIM11P1-201ENST00000369586 178 ntBASIC4.81□□□□□ -1.64
FGD4Q96M96 RNU6-946P-201ENST00000383878 107 ntBASIC4.81□□□□□ -1.64
FGD4Q96M96 RNU6-1297P-201ENST00000384415 104 ntBASIC4.81□□□□□ -1.64
FGD4Q96M96 MIR153-1-201ENST00000384914 90 ntBASIC4.81□□□□□ -1.64
FGD4Q96M96 RNU4-78P-201ENST00000410940 126 ntBASIC4.81□□□□□ -1.64
FGD4Q96M96 VN1R36P-201ENST00000414936 291 ntBASIC4.81□□□□□ -1.64
FGD4Q96M96 AC093106.2-201ENST00000428212 385 ntBASIC4.81□□□□□ -1.64
FGD4Q96M96 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.81□□□□□ -1.64
FGD4Q96M96 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.81□□□□□ -1.64
FGD4Q96M96 AC020550.1-201ENST00000447385 163 ntBASIC4.81□□□□□ -1.64
FGD4Q96M96 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.81□□□□□ -1.64
FGD4Q96M96 Y_RNA.635-201ENST00000459041 101 ntBASIC4.81□□□□□ -1.64
FGD4Q96M96 MTND4P17-201ENST00000470444 350 ntBASIC4.81□□□□□ -1.64
FGD4Q96M96 AC010631.1-201ENST00000474150 156 ntBASIC4.81□□□□□ -1.64
FGD4Q96M96 RNU6-1170P-201ENST00000515974 106 ntBASIC4.81□□□□□ -1.64
FGD4Q96M96 AP005639.2-201ENST00000527592 928 ntBASIC4.81□□□□□ -1.64
FGD4Q96M96 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.81□□□□□ -1.64
FGD4Q96M96 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.81□□□□□ -1.64
FGD4Q96M96 FRG2DP-202ENST00000566967 323 ntBASIC4.81□□□□□ -1.64
FGD4Q96M96 MIR3158-1-201ENST00000583596 81 ntBASIC4.81□□□□□ -1.64
FGD4Q96M96 MIR3942-201ENST00000585264 109 ntBASIC4.81□□□□□ -1.64
FGD4Q96M96 AC008521.1-201ENST00000587471 187 ntBASIC4.81□□□□□ -1.64
FGD4Q96M96 HMGB2P1-201ENST00000591146 634 ntBASIC4.81□□□□□ -1.64
FGD4Q96M96 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.81□□□□□ -1.64
FGD4Q96M96 AC012669.1-201ENST00000603209 283 ntBASIC4.81□□□□□ -1.64
FGD4Q96M96 AC174048.1-201ENST00000603389 144 ntBASIC4.81□□□□□ -1.64
FGD4Q96M96 MIR92B-201ENST00000607575 96 ntBASIC4.81□□□□□ -1.64
FGD4Q96M96 Z82243.1-201ENST00000609432 473 ntBASIC4.81□□□□□ -1.64
FGD4Q96M96 AC015813.4-201ENST00000610469 179 ntBASIC4.81□□□□□ -1.64
FGD4Q96M96 AC006133.1-201ENST00000617106 264 ntBASIC4.81□□□□□ -1.64
FGD4Q96M96 AC090971.5-201ENST00000621102 293 ntBASIC4.81□□□□□ -1.64
FGD4Q96M96 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.81□□□□□ -1.64
FGD4Q96M96 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
FGD4Q96M96 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
FGD4Q96M96 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
FGD4Q96M96 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.8□□□□□ -1.64
FGD4Q96M96 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.8□□□□□ -1.64
FGD4Q96M96 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.8□□□□□ -1.64
FGD4Q96M96 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
FGD4Q96M96 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FGD4Q96M96 AC068254.2-201ENST00000623938 3577 ntBASIC4.8□□□□□ -1.64
FGD4Q96M96 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms