Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 RPS4XP3-201ENST00000398541 413 ntBASIC4.36□□□□□ -1.71
CCDC136Q96JN2 AL359634.1-202ENST00000404721 284 ntBASIC4.36□□□□□ -1.71
CCDC136Q96JN2 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC136Q96JN2 Z99755.1-201ENST00000414048 380 ntBASIC4.36□□□□□ -1.71
CCDC136Q96JN2 AL451054.2-201ENST00000420896 202 ntBASIC4.36□□□□□ -1.71
CCDC136Q96JN2 AC007283.2-201ENST00000424739 197 ntBASIC4.36□□□□□ -1.71
CCDC136Q96JN2 RPL7P46-201ENST00000425129 740 ntBASIC4.36□□□□□ -1.71
CCDC136Q96JN2 AL356867.1-201ENST00000429623 299 ntBASIC4.36□□□□□ -1.71
CCDC136Q96JN2 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC136Q96JN2 TAAR7P-201ENST00000436141 242 ntBASIC4.36□□□□□ -1.71
CCDC136Q96JN2 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC136Q96JN2 PDSS1P2-201ENST00000449397 678 ntBASIC4.36□□□□□ -1.71
CCDC136Q96JN2 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC136Q96JN2 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC136Q96JN2 RPL31P3-201ENST00000458430 332 ntBASIC4.36□□□□□ -1.71
CCDC136Q96JN2 RNA5SP269-201ENST00000459032 137 ntBASIC4.36□□□□□ -1.71
CCDC136Q96JN2 CDC42P4-201ENST00000510507 563 ntBASIC4.36□□□□□ -1.71
CCDC136Q96JN2 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC136Q96JN2 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC136Q96JN2 CKS1BP3-201ENST00000600888 237 ntBASIC4.36□□□□□ -1.71
CCDC136Q96JN2 AC073544.2-201ENST00000601155 540 ntBASIC4.36□□□□□ -1.71
CCDC136Q96JN2 AC006557.5-201ENST00000603126 811 ntBASIC4.36□□□□□ -1.71
CCDC136Q96JN2 AL109618.2-201ENST00000605527 211 ntBASIC4.36□□□□□ -1.71
CCDC136Q96JN2 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CCDC136Q96JN2 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC136Q96JN2 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC136Q96JN2 CUL1P1-201ENST00000509510 2425 ntBASIC4.35□□□□□ -1.71
CCDC136Q96JN2 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC136Q96JN2 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC136Q96JN2 RNU6-297P-201ENST00000384636 107 ntBASIC4.35□□□□□ -1.71
CCDC136Q96JN2 RNU1-101P-201ENST00000391171 127 ntBASIC4.35□□□□□ -1.71
CCDC136Q96JN2 RPL32P23-201ENST00000397237 405 ntBASIC4.35□□□□□ -1.71
CCDC136Q96JN2 AL445189.1-201ENST00000405722 338 ntBASIC4.35□□□□□ -1.71
CCDC136Q96JN2 TMEM167AP1-201ENST00000423409 219 ntBASIC4.35□□□□□ -1.71
CCDC136Q96JN2 AL589872.1-201ENST00000426602 288 ntBASIC4.35□□□□□ -1.71
CCDC136Q96JN2 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC136Q96JN2 PGBD4P3-201ENST00000440731 581 ntBASIC4.35□□□□□ -1.71
CCDC136Q96JN2 AC009237.8-201ENST00000445492 379 ntBASIC4.35□□□□□ -1.71
CCDC136Q96JN2 ST13P20-201ENST00000447996 1065 ntBASIC4.35□□□□□ -1.71
CCDC136Q96JN2 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC136Q96JN2 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC136Q96JN2 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC136Q96JN2 LARP1BP2-201ENST00000486594 519 ntBASIC4.35□□□□□ -1.71
CCDC136Q96JN2 RN7SL283P-201ENST00000489055 303 ntBASIC4.35□□□□□ -1.71
CCDC136Q96JN2 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC136Q96JN2 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC4.35□□□□□ -1.71
CCDC136Q96JN2 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC136Q96JN2 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.35□□□□□ -1.71
CCDC136Q96JN2 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC136Q96JN2 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC136Q96JN2 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.35□□□□□ -1.71
CCDC136Q96JN2 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC136Q96JN2 RPL23AP84-201ENST00000571193 464 ntBASIC4.35□□□□□ -1.71
CCDC136Q96JN2 AC119751.7-201ENST00000600494 245 ntBASIC4.35□□□□□ -1.71
CCDC136Q96JN2 SEPT7P9-203ENST00000604116 343 ntBASIC4.35□□□□□ -1.71
CCDC136Q96JN2 AC008277.2-201ENST00000605196 797 ntBASIC4.35□□□□□ -1.71
CCDC136Q96JN2 AC097065.2-201ENST00000608159 533 ntBASIC4.35□□□□□ -1.71
CCDC136Q96JN2 AC004908.3-201ENST00000610248 625 ntBASIC4.35□□□□□ -1.71
CCDC136Q96JN2 MFSD8-233ENST00000641482 4860 ntBASIC4.35□□□□□ -1.71
CCDC136Q96JN2 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC136Q96JN2 AC017071.1-201ENST00000564407 2204 ntBASIC4.34□□□□□ -1.71
CCDC136Q96JN2 SNORD9-201ENST00000362566 104 ntBASIC4.34□□□□□ -1.71
CCDC136Q96JN2 Y_RNA.77-201ENST00000362962 107 ntBASIC4.34□□□□□ -1.71
CCDC136Q96JN2 RNU4-1-201ENST00000363925 141 ntBASIC4.34□□□□□ -1.71
CCDC136Q96JN2 RN7SKP156-201ENST00000410308 342 ntBASIC4.34□□□□□ -1.71
CCDC136Q96JN2 RPS3AP3-201ENST00000411933 242 ntBASIC4.34□□□□□ -1.71
CCDC136Q96JN2 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC136Q96JN2 SDCBPP3-201ENST00000419629 891 ntBASIC4.34□□□□□ -1.71
CCDC136Q96JN2 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC136Q96JN2 USP12PX-201ENST00000432383 1057 ntBASIC4.34□□□□□ -1.71
CCDC136Q96JN2 FCF1P1-201ENST00000432690 571 ntBASIC4.34□□□□□ -1.71
CCDC136Q96JN2 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC136Q96JN2 MTND6P13-201ENST00000443510 523 ntBASIC4.34□□□□□ -1.71
CCDC136Q96JN2 RAP1BP2-201ENST00000478270 544 ntBASIC4.34□□□□□ -1.71
CCDC136Q96JN2 AC010587.1-201ENST00000505809 469 ntBASIC4.34□□□□□ -1.71
CCDC136Q96JN2 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC136Q96JN2 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CCDC136Q96JN2 ARL2BPP2-201ENST00000550907 489 ntBASIC4.34□□□□□ -1.71
CCDC136Q96JN2 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC136Q96JN2 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.34□□□□□ -1.71
CCDC136Q96JN2 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC136Q96JN2 AC005951.1-201ENST00000576706 485 ntBASIC4.34□□□□□ -1.71
CCDC136Q96JN2 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC136Q96JN2 AC027309.3-201ENST00000623419 351 ntBASIC4.34□□□□□ -1.71
CCDC136Q96JN2 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC136Q96JN2 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
CCDC136Q96JN2 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC136Q96JN2 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CCDC136Q96JN2 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC136Q96JN2 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC136Q96JN2 GNG5P1-201ENST00000255500 204 ntBASIC4.33□□□□□ -1.72
CCDC136Q96JN2 RNU5E-1-201ENST00000362477 120 ntBASIC4.33□□□□□ -1.72
CCDC136Q96JN2 RNY4P34-201ENST00000364779 95 ntBASIC4.33□□□□□ -1.72
CCDC136Q96JN2 CYCSP19-201ENST00000411715 316 ntBASIC4.33□□□□□ -1.72
CCDC136Q96JN2 AC007919.1-201ENST00000429380 217 ntBASIC4.33□□□□□ -1.72
CCDC136Q96JN2 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC136Q96JN2 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC136Q96JN2 USP9YP29-201ENST00000445112 563 ntBASIC4.33□□□□□ -1.72
CCDC136Q96JN2 AL360221.1-201ENST00000445989 335 ntBASIC4.33□□□□□ -1.72
CCDC136Q96JN2 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms