Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
SPG11Q96JI7 FCF1P2-201ENST00000415284 583 ntBASIC1.06□□□□□ -2.24
SPG11Q96JI7 IFNA20P-201ENST00000436840 528 ntBASIC1.06□□□□□ -2.24
SPG11Q96JI7 AC234775.1-201ENST00000454247 670 ntBASIC1.06□□□□□ -2.24
SPG11Q96JI7 AC104472.2-201ENST00000469035 601 ntBASIC1.06□□□□□ -2.24
SPG11Q96JI7 AC005912.1-201ENST00000495392 255 ntBASIC1.06□□□□□ -2.24
SPG11Q96JI7 AC093281.2-201ENST00000510153 597 ntBASIC1.06□□□□□ -2.24
SPG11Q96JI7 AC090821.2-201ENST00000523552 176 ntBASIC1.06□□□□□ -2.24
SPG11Q96JI7 AP003072.2-201ENST00000527756 676 ntBASIC1.06□□□□□ -2.24
SPG11Q96JI7 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.06□□□□□ -2.24
SPG11Q96JI7 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.06□□□□□ -2.24
SPG11Q96JI7 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.06□□□□□ -2.24
SPG11Q96JI7 MIR6513-201ENST00000621188 64 ntBASIC1.06□□□□□ -2.24
SPG11Q96JI7 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.06□□□□□ -2.24
SPG11Q96JI7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SPG11Q96JI7 AC009902.3-201ENST00000606235 2172 ntBASIC1.05□□□□□ -2.24
SPG11Q96JI7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SPG11Q96JI7 MIR1265-201ENST00000408444 86 ntBASIC1.05□□□□□ -2.24
SPG11Q96JI7 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.05□□□□□ -2.24
SPG11Q96JI7 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.05□□□□□ -2.24
SPG11Q96JI7 RNA5SP384-201ENST00000516615 116 ntBASIC1.05□□□□□ -2.24
SPG11Q96JI7 AC074029.2-201ENST00000551045 634 ntBASIC1.05□□□□□ -2.24
SPG11Q96JI7 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.05□□□□□ -2.24
SPG11Q96JI7 MIR4295-201ENST00000585286 85 ntBASIC1.05□□□□□ -2.24
SPG11Q96JI7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
SPG11Q96JI7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SPG11Q96JI7 MTND5P10-201ENST00000603719 1809 ntBASIC1.05□□□□□ -2.24
SPG11Q96JI7 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.05□□□□□ -2.24
SPG11Q96JI7 AL118496.1-201ENST00000440201 1812 ntBASIC1.05□□□□□ -2.24
SPG11Q96JI7 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SPG11Q96JI7 SSXP9-201ENST00000417503 292 ntBASIC1.05□□□□□ -2.24
SPG11Q96JI7 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC1.05□□□□□ -2.24
SPG11Q96JI7 HSPE1P3-201ENST00000559254 309 ntBASIC1.05□□□□□ -2.24
SPG11Q96JI7 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SPG11Q96JI7 MIR6759-201ENST00000638110 65 ntBASIC1.05□□□□□ -2.24
SPG11Q96JI7 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
SPG11Q96JI7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
SPG11Q96JI7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
SPG11Q96JI7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
SPG11Q96JI7 CYCSP33-201ENST00000414485 327 ntBASIC1.04□□□□□ -2.24
SPG11Q96JI7 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.04□□□□□ -2.24
SPG11Q96JI7 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC1.04□□□□□ -2.24
SPG11Q96JI7 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.04□□□□□ -2.24
SPG11Q96JI7 RPL35AP22-201ENST00000436855 335 ntBASIC1.04□□□□□ -2.24
SPG11Q96JI7 JTBP1-201ENST00000441314 247 ntBASIC1.04□□□□□ -2.24
SPG11Q96JI7 ARL2BPP4-201ENST00000506854 471 ntBASIC1.04□□□□□ -2.24
SPG11Q96JI7 AK3P2-201ENST00000507976 429 ntBASIC1.04□□□□□ -2.24
SPG11Q96JI7 RNA5SP82-201ENST00000516707 92 ntBASIC1.04□□□□□ -2.24
SPG11Q96JI7 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC1.04□□□□□ -2.24
SPG11Q96JI7 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
SPG11Q96JI7 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
SPG11Q96JI7 AC121333.1-201ENST00000567488 2709 ntBASIC1.04□□□□□ -2.24
SPG11Q96JI7 AC007098.1-201ENST00000420122 367 ntBASIC1.04□□□□□ -2.24
SPG11Q96JI7 RPL23AP41-201ENST00000484754 458 ntBASIC1.04□□□□□ -2.24
SPG11Q96JI7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
SPG11Q96JI7 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.03□□□□□ -2.24
SPG11Q96JI7 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC1.03□□□□□ -2.24
SPG11Q96JI7 AC087343.1-201ENST00000477341 475 ntBASIC1.03□□□□□ -2.24
SPG11Q96JI7 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.03□□□□□ -2.24
SPG11Q96JI7 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.03□□□□□ -2.24
SPG11Q96JI7 RNA5SP309-201ENST00000516670 106 ntBASIC1.03□□□□□ -2.24
SPG11Q96JI7 RNU6-56P-201ENST00000516986 93 ntBASIC1.03□□□□□ -2.24
SPG11Q96JI7 MIR5589-201ENST00000579442 60 ntBASIC1.03□□□□□ -2.24
SPG11Q96JI7 AC146944.4-201ENST00000602697 718 ntBASIC1.03□□□□□ -2.24
SPG11Q96JI7 AC112503.2-201ENST00000609005 552 ntBASIC1.03□□□□□ -2.24
SPG11Q96JI7 MIR2909-201ENST00000617113 69 ntBASIC1.03□□□□□ -2.24
SPG11Q96JI7 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
SPG11Q96JI7 AC018630.2-201ENST00000534866 2403 ntBASIC1.03□□□□□ -2.25
SPG11Q96JI7 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
SPG11Q96JI7 MIR409-201ENST00000362237 79 ntBASIC1.03□□□□□ -2.25
SPG11Q96JI7 RNU6-288P-201ENST00000363690 104 ntBASIC1.03□□□□□ -2.25
SPG11Q96JI7 AC008850.1-201ENST00000427546 362 ntBASIC1.03□□□□□ -2.25
SPG11Q96JI7 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC1.03□□□□□ -2.25
SPG11Q96JI7 BOLA3P3-201ENST00000505182 232 ntBASIC1.03□□□□□ -2.25
SPG11Q96JI7 OR5AQ1P-201ENST00000527596 927 ntBASIC1.03□□□□□ -2.25
SPG11Q96JI7 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.03□□□□□ -2.25
SPG11Q96JI7 ANP32BP3-201ENST00000559213 706 ntBASIC1.03□□□□□ -2.25
SPG11Q96JI7 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.03□□□□□ -2.25
SPG11Q96JI7 AC012557.2-201ENST00000605919 418 ntBASIC1.03□□□□□ -2.25
SPG11Q96JI7 AC108706.1-201ENST00000611053 297 ntBASIC1.03□□□□□ -2.25
SPG11Q96JI7 AC011477.1-204ENST00000623416 1325 ntBASIC1.02□□□□□ -2.25
SPG11Q96JI7 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.02□□□□□ -2.25
SPG11Q96JI7 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.02□□□□□ -2.25
SPG11Q96JI7 RPS26P21-201ENST00000475397 348 ntBASIC1.02□□□□□ -2.25
SPG11Q96JI7 RPL21P131-201ENST00000497298 483 ntBASIC1.02□□□□□ -2.25
SPG11Q96JI7 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.02□□□□□ -2.25
SPG11Q96JI7 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.02□□□□□ -2.25
SPG11Q96JI7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.02□□□□□ -2.25
SPG11Q96JI7 U73023.1-201ENST00000603134 700 ntBASIC1.02□□□□□ -2.25
SPG11Q96JI7 CENPCP1-201ENST00000533085 2578 ntBASIC1.02□□□□□ -2.25
SPG11Q96JI7 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
SPG11Q96JI7 Y_RNA.324-201ENST00000365165 102 ntBASIC1.01□□□□□ -2.25
SPG11Q96JI7 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
SPG11Q96JI7 Z95118.1-201ENST00000421372 247 ntBASIC1.01□□□□□ -2.25
SPG11Q96JI7 HMGN2P20-201ENST00000437531 273 ntBASIC1.01□□□□□ -2.25
SPG11Q96JI7 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.01□□□□□ -2.25
SPG11Q96JI7 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.01□□□□□ -2.25
SPG11Q96JI7 AC023790.1-201ENST00000482174 347 ntBASIC1.01□□□□□ -2.25
SPG11Q96JI7 SCARNA1-201ENST00000517138 166 ntBASIC1.01□□□□□ -2.25
SPG11Q96JI7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms