Protein–RNA interactions for Protein: Q96A33

CCDC47, Coiled-coil domain-containing protein 47, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47Q96A33 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CCDC47Q96A33 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC47Q96A33 RNU6-777P-201ENST00000364265 104 ntBASIC3.08□□□□□ -1.92
CCDC47Q96A33 RNU6-432P-201ENST00000384196 109 ntBASIC3.08□□□□□ -1.92
CCDC47Q96A33 RNU2-33P-201ENST00000410344 192 ntBASIC3.08□□□□□ -1.92
CCDC47Q96A33 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC47Q96A33 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC47Q96A33 AL445687.1-201ENST00000439946 251 ntBASIC3.08□□□□□ -1.92
CCDC47Q96A33 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC47Q96A33 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.08□□□□□ -1.92
CCDC47Q96A33 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC47Q96A33 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC47Q96A33 RPS20P22-201ENST00000473700 357 ntBASIC3.08□□□□□ -1.92
CCDC47Q96A33 AP001025.2-201ENST00000490908 477 ntBASIC3.08□□□□□ -1.92
CCDC47Q96A33 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC47Q96A33 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC47Q96A33 RNA5SP471-201ENST00000516971 106 ntBASIC3.08□□□□□ -1.92
CCDC47Q96A33 SNORA31.18-201ENST00000517043 134 ntBASIC3.08□□□□□ -1.92
CCDC47Q96A33 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC47Q96A33 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC47Q96A33 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC47Q96A33 AC087465.1-201ENST00000560574 245 ntBASIC3.08□□□□□ -1.92
CCDC47Q96A33 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC47Q96A33 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC47Q96A33 HMGN2P15-201ENST00000585707 270 ntBASIC3.08□□□□□ -1.92
CCDC47Q96A33 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC47Q96A33 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.08□□□□□ -1.92
CCDC47Q96A33 TUG1_2.1-201ENST00000614234 87 ntBASIC3.08□□□□□ -1.92
CCDC47Q96A33 MTND1P37-201ENST00000636562 264 ntBASIC3.08□□□□□ -1.92
CCDC47Q96A33 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC47Q96A33 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC47Q96A33 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC47Q96A33 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC47Q96A33 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC47Q96A33 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC47Q96A33 RNU6-140P-201ENST00000384566 108 ntBASIC3.07□□□□□ -1.92
CCDC47Q96A33 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CCDC47Q96A33 AL590084.2-201ENST00000401481 382 ntBASIC3.07□□□□□ -1.92
CCDC47Q96A33 TXNP7-201ENST00000406296 293 ntBASIC3.07□□□□□ -1.92
CCDC47Q96A33 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.07□□□□□ -1.92
CCDC47Q96A33 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC47Q96A33 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.07□□□□□ -1.92
CCDC47Q96A33 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC47Q96A33 OR10R1P-201ENST00000441524 1141 ntBASIC3.07□□□□□ -1.92
CCDC47Q96A33 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC47Q96A33 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.07□□□□□ -1.92
CCDC47Q96A33 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.07□□□□□ -1.92
CCDC47Q96A33 RPL9P33-201ENST00000484311 566 ntBASIC3.07□□□□□ -1.92
CCDC47Q96A33 AC135721.1-201ENST00000497954 479 ntBASIC3.07□□□□□ -1.92
CCDC47Q96A33 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC47Q96A33 AC034159.1-201ENST00000513885 583 ntBASIC3.07□□□□□ -1.92
CCDC47Q96A33 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.07□□□□□ -1.92
CCDC47Q96A33 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC47Q96A33 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.07□□□□□ -1.92
CCDC47Q96A33 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC47Q96A33 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC47Q96A33 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC47Q96A33 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC47Q96A33 MIR3616-201ENST00000584070 92 ntBASIC3.07□□□□□ -1.92
CCDC47Q96A33 AC011471.1-201ENST00000585766 187 ntBASIC3.07□□□□□ -1.92
CCDC47Q96A33 AL357094.1-201ENST00000603845 844 ntBASIC3.07□□□□□ -1.92
CCDC47Q96A33 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC47Q96A33 AC099786.3-201ENST00000565735 1410 ntBASIC3.07□□□□□ -1.92
CCDC47Q96A33 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CCDC47Q96A33 FTLP6-201ENST00000355274 422 ntBASIC3.06□□□□□ -1.92
CCDC47Q96A33 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC47Q96A33 U3.20-201ENST00000390909 217 ntBASIC3.06□□□□□ -1.92
CCDC47Q96A33 SNORA48.5-201ENST00000391143 135 ntBASIC3.06□□□□□ -1.92
CCDC47Q96A33 AL122016.1-201ENST00000403365 367 ntBASIC3.06□□□□□ -1.92
CCDC47Q96A33 VN1R51P-201ENST00000411675 945 ntBASIC3.06□□□□□ -1.92
CCDC47Q96A33 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC47Q96A33 UBE2FP1-201ENST00000416536 447 ntBASIC3.06□□□□□ -1.92
CCDC47Q96A33 AL451054.2-201ENST00000420896 202 ntBASIC3.06□□□□□ -1.92
CCDC47Q96A33 AL451062.2-201ENST00000427515 271 ntBASIC3.06□□□□□ -1.92
CCDC47Q96A33 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC47Q96A33 EXOSC3P1-201ENST00000448649 500 ntBASIC3.06□□□□□ -1.92
CCDC47Q96A33 USP9YP10-201ENST00000454868 628 ntBASIC3.06□□□□□ -1.92
CCDC47Q96A33 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC47Q96A33 snoU109.3-201ENST00000459477 145 ntBASIC3.06□□□□□ -1.92
CCDC47Q96A33 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC47Q96A33 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC47Q96A33 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC47Q96A33 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC47Q96A33 AC009163.5-201ENST00000575421 637 ntBASIC3.06□□□□□ -1.92
CCDC47Q96A33 AF038458.1-201ENST00000588406 262 ntBASIC3.06□□□□□ -1.92
CCDC47Q96A33 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.06□□□□□ -1.92
CCDC47Q96A33 AL137003.2-201ENST00000606924 2538 ntBASIC3.06□□□□□ -1.92
CCDC47Q96A33 SDR42E1P2-201ENST00000614861 481 ntBASIC3.06□□□□□ -1.92
CCDC47Q96A33 MAPK10-266ENST00000641066 6555 ntBASIC3.06□□□□□ -1.92
CCDC47Q96A33 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC47Q96A33 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC47Q96A33 AC006378.2-201ENST00000623178 2476 ntBASIC3.05□□□□□ -1.92
CCDC47Q96A33 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
CCDC47Q96A33 ASNSP3-201ENST00000451989 1306 ntBASIC3.05□□□□□ -1.92
CCDC47Q96A33 MIR122-201ENST00000385044 85 ntBASIC3.05□□□□□ -1.92
CCDC47Q96A33 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC47Q96A33 AL513331.1-201ENST00000411908 397 ntBASIC3.05□□□□□ -1.92
CCDC47Q96A33 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC47Q96A33 RPL36AP6-201ENST00000435770 321 ntBASIC3.05□□□□□ -1.92
CCDC47Q96A33 RPL35AP22-201ENST00000436855 335 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms