Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AL034351.1-201ENST00000605288 668 ntBASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 SNORA62.6-201ENST00000606322 83 ntBASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 AC130324.3-201ENST00000614165 542 ntBASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 TUG1_2.1-201ENST00000614234 87 ntBASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 MIR492-201ENST00000638676 116 ntBASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
ATG4AQ8WYN0 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.78
ATG4AQ8WYN0 AC004972.1-201ENST00000623934 2209 ntBASIC3.9□□□□□ -1.78
ATG4AQ8WYN0 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.9□□□□□ -1.78
ATG4AQ8WYN0 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 Y_RNA.61-201ENST00000362835 102 ntBASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 SNORA62.1-201ENST00000364287 154 ntBASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 RNA5SP317-201ENST00000410176 116 ntBASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 RNA5SP311-201ENST00000411290 116 ntBASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 MTCYBP8-201ENST00000422855 651 ntBASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 AC091390.1-201ENST00000433904 331 ntBASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 MTCO3P45-201ENST00000443036 613 ntBASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 UBE2V1P7-201ENST00000446395 340 ntBASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 RPS29P15-201ENST00000458329 171 ntBASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 AC008481.1-201ENST00000463278 396 ntBASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 EIF4EP3-201ENST00000498782 656 ntBASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 RNA5SP315-201ENST00000516340 116 ntBASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 RNU6-1092P-201ENST00000516955 87 ntBASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 RNA5SP312-201ENST00000517068 116 ntBASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 AP001029.3-201ENST00000588063 596 ntBASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 AC018638.8-201ENST00000588755 281 ntBASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 AC010525.2-201ENST00000590920 195 ntBASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 SNHG22-203ENST00000617833 660 ntBASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 AC243312.2-201ENST00000623340 601 ntBASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 AC244205.2-202ENST00000635781 342 ntBASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 AC090337.1-201ENST00000579651 2074 ntBASIC3.9□□□□□ -1.79
ATG4AQ8WYN0 MTND4P29-201ENST00000503122 1372 ntBASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 OR4G1P-203ENST00000641984 1631 ntBASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 Y_RNA.11-201ENST00000362375 109 ntBASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 Y_RNA.263-201ENST00000364659 114 ntBASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 RNA5SP97-201ENST00000365006 84 ntBASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 AC099677.1-201ENST00000420575 175 ntBASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 CBWD4P-201ENST00000445695 655 ntBASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 AC026979.1-201ENST00000492525 396 ntBASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 MTND3P22-201ENST00000510932 243 ntBASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 RN7SKP219-201ENST00000516825 296 ntBASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 AC008489.1-201ENST00000524271 483 ntBASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 AC103843.2-201ENST00000530523 682 ntBASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 AC018630.1-201ENST00000541376 925 ntBASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 NCAPGP2-201ENST00000557911 754 ntBASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 AL138976.2-201ENST00000563989 694 ntBASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 MIR4775-201ENST00000581168 75 ntBASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 AC011712.1-201ENST00000588959 234 ntBASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 AC012443.1-201ENST00000605605 231 ntBASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 MIR6716-201ENST00000613413 80 ntBASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 AC083809.1-201ENST00000615051 472 ntBASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 AC010338.1-201ENST00000621823 717 ntBASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 AC112484.5-201ENST00000624189 228 ntBASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms