Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.02□□□□□ -2.09
LMX1AQ8TE12 MTND4P2-201ENST00000507767 1203 ntBASIC2.02□□□□□ -2.09
LMX1AQ8TE12 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.02□□□□□ -2.09
LMX1AQ8TE12 SNORA48.10-201ENST00000516965 160 ntBASIC2.02□□□□□ -2.09
LMX1AQ8TE12 AP003168.1-201ENST00000530091 307 ntBASIC2.02□□□□□ -2.09
LMX1AQ8TE12 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.02□□□□□ -2.09
LMX1AQ8TE12 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.02□□□□□ -2.09
LMX1AQ8TE12 AC078814.3-201ENST00000553036 491 ntBASIC2.02□□□□□ -2.09
LMX1AQ8TE12 MTCYBP27-201ENST00000555160 670 ntBASIC2.02□□□□□ -2.09
LMX1AQ8TE12 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.02□□□□□ -2.09
LMX1AQ8TE12 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.02□□□□□ -2.09
LMX1AQ8TE12 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.02□□□□□ -2.09
LMX1AQ8TE12 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.02□□□□□ -2.09
LMX1AQ8TE12 AP002826.1-201ENST00000608835 315 ntBASIC2.02□□□□□ -2.09
LMX1AQ8TE12 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.02□□□□□ -2.09
LMX1AQ8TE12 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.02□□□□□ -2.09
LMX1AQ8TE12 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
LMX1AQ8TE12 AC007336.1-201ENST00000576365 3828 ntBASIC2.02□□□□□ -2.09
LMX1AQ8TE12 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LMX1AQ8TE12 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.01□□□□□ -2.09
LMX1AQ8TE12 Y_RNA.110-201ENST00000363220 99 ntBASIC2.01□□□□□ -2.09
LMX1AQ8TE12 RNU6-236P-201ENST00000363886 106 ntBASIC2.01□□□□□ -2.09
LMX1AQ8TE12 RNU6-76P-201ENST00000384060 104 ntBASIC2.01□□□□□ -2.09
LMX1AQ8TE12 HMGB1P11-201ENST00000413899 637 ntBASIC2.01□□□□□ -2.09
LMX1AQ8TE12 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.01□□□□□ -2.09
LMX1AQ8TE12 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.01□□□□□ -2.09
LMX1AQ8TE12 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.01□□□□□ -2.09
LMX1AQ8TE12 AL365496.1-201ENST00000426885 215 ntBASIC2.01□□□□□ -2.09
LMX1AQ8TE12 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.01□□□□□ -2.09
LMX1AQ8TE12 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.01□□□□□ -2.09
LMX1AQ8TE12 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.01□□□□□ -2.09
LMX1AQ8TE12 RNF2P1-201ENST00000442955 1010 ntBASIC2.01□□□□□ -2.09
LMX1AQ8TE12 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.01□□□□□ -2.09
LMX1AQ8TE12 USP9YP34-201ENST00000453983 808 ntBASIC2.01□□□□□ -2.09
LMX1AQ8TE12 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.01□□□□□ -2.09
LMX1AQ8TE12 RPL23AP70-201ENST00000483361 460 ntBASIC2.01□□□□□ -2.09
LMX1AQ8TE12 AC109486.1-201ENST00000486833 374 ntBASIC2.01□□□□□ -2.09
LMX1AQ8TE12 AC093801.2-201ENST00000503966 1050 ntBASIC2.01□□□□□ -2.09
LMX1AQ8TE12 CDC42P4-201ENST00000510507 563 ntBASIC2.01□□□□□ -2.09
LMX1AQ8TE12 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.01□□□□□ -2.09
LMX1AQ8TE12 RNU6-295P-201ENST00000516901 104 ntBASIC2.01□□□□□ -2.09
LMX1AQ8TE12 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.01□□□□□ -2.09
LMX1AQ8TE12 OR5AK1P-201ENST00000524837 922 ntBASIC2.01□□□□□ -2.09
LMX1AQ8TE12 OR4P1P-201ENST00000530808 1136 ntBASIC2.01□□□□□ -2.09
LMX1AQ8TE12 AC087241.2-201ENST00000535801 324 ntBASIC2.01□□□□□ -2.09
LMX1AQ8TE12 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.01□□□□□ -2.09
LMX1AQ8TE12 AC090502.2-201ENST00000549267 280 ntBASIC2.01□□□□□ -2.09
LMX1AQ8TE12 SETP7-201ENST00000552169 453 ntBASIC2.01□□□□□ -2.09
LMX1AQ8TE12 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.01□□□□□ -2.09
LMX1AQ8TE12 AC103810.1-201ENST00000579873 453 ntBASIC2.01□□□□□ -2.09
LMX1AQ8TE12 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.01□□□□□ -2.09
LMX1AQ8TE12 AL136363.1-201ENST00000605349 337 ntBASIC2.01□□□□□ -2.09
LMX1AQ8TE12 AP000238.1-201ENST00000608759 426 ntBASIC2.01□□□□□ -2.09
LMX1AQ8TE12 AC008759.3-201ENST00000613300 508 ntBASIC2.01□□□□□ -2.09
LMX1AQ8TE12 AL157770.1-201ENST00000623049 439 ntBASIC2.01□□□□□ -2.09
LMX1AQ8TE12 AC022336.2-201ENST00000568966 2538 ntBASIC2.01□□□□□ -2.09
LMX1AQ8TE12 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
LMX1AQ8TE12 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
LMX1AQ8TE12 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
LMX1AQ8TE12 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
LMX1AQ8TE12 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2□□□□□ -2.09
LMX1AQ8TE12 AC008568.2-201ENST00000623862 2313 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2□□□□□ -2.09
LMX1AQ8TE12 RNU6-1066P-201ENST00000363573 105 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 5S_rRNA.2-201ENST00000391293 112 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 AC019129.1-201ENST00000403786 261 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 RNU2-2P-201ENST00000410396 191 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 RNU6-1140P-201ENST00000410517 106 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2□□□□□ -2.09
LMX1AQ8TE12 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2□□□□□ -2.09
LMX1AQ8TE12 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2□□□□□ -2.09
LMX1AQ8TE12 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2□□□□□ -2.09
LMX1AQ8TE12 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2□□□□□ -2.09
LMX1AQ8TE12 RPL30P5-201ENST00000494923 336 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2□□□□□ -2.09
LMX1AQ8TE12 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2□□□□□ -2.09
LMX1AQ8TE12 RNU5A-7P-201ENST00000515979 116 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 snoZ278.1-201ENST00000517059 112 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 AC023632.1-201ENST00000518463 375 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2□□□□□ -2.09
LMX1AQ8TE12 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2□□□□□ -2.09
LMX1AQ8TE12 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2□□□□□ -2.09
LMX1AQ8TE12 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2□□□□□ -2.09
LMX1AQ8TE12 PRELID2P1-201ENST00000552837 301 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 LARP7P2-201ENST00000575306 125 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 AC009977.1-201ENST00000586015 570 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 AC090330.1-201ENST00000588646 764 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 AC120053.1-201ENST00000607706 736 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 AP000254.1-201ENST00000609934 520 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 U2.15-201ENST00000611544 191 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 U2.16-201ENST00000613119 191 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 U2.12-201ENST00000613778 191 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 U2.20-201ENST00000613956 192 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 U2.9-201ENST00000615427 191 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 AL450472.3-201ENST00000615578 367 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 U2.11-201ENST00000616345 191 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 U2.2-201ENST00000616535 191 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 U2.3-201ENST00000617785 191 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 U2.19-201ENST00000618602 191 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 RNU2-1-201ENST00000618664 191 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms