Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
ALMS1Q8TCU4 MIR625-201ENST00000385047 85 ntBASIC1.01□□□□□ -2.25
ALMS1Q8TCU4 SRIP3-201ENST00000413200 219 ntBASIC1.01□□□□□ -2.25
ALMS1Q8TCU4 PGBD4P6-201ENST00000421501 610 ntBASIC1.01□□□□□ -2.25
ALMS1Q8TCU4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.01□□□□□ -2.25
ALMS1Q8TCU4 AC022447.3-201ENST00000506865 495 ntBASIC1.01□□□□□ -2.25
ALMS1Q8TCU4 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.01□□□□□ -2.25
ALMS1Q8TCU4 AC106052.1-201ENST00000608029 497 ntBASIC1.01□□□□□ -2.25
ALMS1Q8TCU4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.01□□□□□ -2.25
ALMS1Q8TCU4 AC007342.9-201ENST00000623877 1385 ntBASIC1.01□□□□□ -2.25
ALMS1Q8TCU4 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
ALMS1Q8TCU4 Y_RNA.36-201ENST00000362602 112 ntBASIC1□□□□□ -2.25
ALMS1Q8TCU4 RNU4-51P-201ENST00000364206 140 ntBASIC1□□□□□ -2.25
ALMS1Q8TCU4 DNAJC19P6-201ENST00000401853 280 ntBASIC1□□□□□ -2.25
ALMS1Q8TCU4 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1□□□□□ -2.25
ALMS1Q8TCU4 HMGB1P46-201ENST00000520062 610 ntBASIC1□□□□□ -2.25
ALMS1Q8TCU4 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1□□□□□ -2.25
ALMS1Q8TCU4 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1□□□□□ -2.25
ALMS1Q8TCU4 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1□□□□□ -2.25
ALMS1Q8TCU4 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1□□□□□ -2.25
ALMS1Q8TCU4 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1□□□□□ -2.25
ALMS1Q8TCU4 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1□□□□□ -2.25
ALMS1Q8TCU4 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1□□□□□ -2.25
ALMS1Q8TCU4 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1□□□□□ -2.25
ALMS1Q8TCU4 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1□□□□□ -2.25
ALMS1Q8TCU4 NIFKP8-201ENST00000560500 874 ntBASIC1□□□□□ -2.25
ALMS1Q8TCU4 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
ALMS1Q8TCU4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1□□□□□ -2.25
ALMS1Q8TCU4 HMGN2P18-201ENST00000450680 270 ntBASIC1□□□□□ -2.25
ALMS1Q8TCU4 AC096992.1-201ENST00000459808 709 ntBASIC1□□□□□ -2.25
ALMS1Q8TCU4 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1□□□□□ -2.25
ALMS1Q8TCU4 SUMO2P6-201ENST00000505273 288 ntBASIC1□□□□□ -2.25
ALMS1Q8TCU4 AP005660.1-201ENST00000522972 293 ntBASIC1□□□□□ -2.25
ALMS1Q8TCU4 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1□□□□□ -2.25
ALMS1Q8TCU4 AC013444.2-201ENST00000603317 787 ntBASIC1□□□□□ -2.25
ALMS1Q8TCU4 AL121917.1-203ENST00000605534 577 ntBASIC1□□□□□ -2.25
ALMS1Q8TCU4 AC097504.2-201ENST00000608088 454 ntBASIC1□□□□□ -2.25
ALMS1Q8TCU4 MIR6078-201ENST00000611069 100 ntBASIC1□□□□□ -2.25
ALMS1Q8TCU4 AC025048.6-202ENST00000627667 438 ntBASIC1□□□□□ -2.25
ALMS1Q8TCU4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
ALMS1Q8TCU4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1□□□□□ -2.25
ALMS1Q8TCU4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1□□□□□ -2.25
ALMS1Q8TCU4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1□□□□□ -2.25
ALMS1Q8TCU4 SNRPEP2-201ENST00000397592 279 ntBASIC1□□□□□ -2.25
ALMS1Q8TCU4 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1□□□□□ -2.25
ALMS1Q8TCU4 MTND3P6-201ENST00000485242 339 ntBASIC1□□□□□ -2.25
ALMS1Q8TCU4 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1□□□□□ -2.25
ALMS1Q8TCU4 AC019176.1-201ENST00000518519 225 ntBASIC1□□□□□ -2.25
ALMS1Q8TCU4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1□□□□□ -2.25
ALMS1Q8TCU4 AC016957.1-201ENST00000534895 309 ntBASIC1□□□□□ -2.25
ALMS1Q8TCU4 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1□□□□□ -2.25
ALMS1Q8TCU4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1□□□□□ -2.25
ALMS1Q8TCU4 MTCO1P40-201ENST00000574371 625 ntBASIC1□□□□□ -2.25
ALMS1Q8TCU4 AL031274.2-201ENST00000599419 203 ntBASIC1□□□□□ -2.25
ALMS1Q8TCU4 AC136443.5-201ENST00000603741 370 ntBASIC1□□□□□ -2.25
ALMS1Q8TCU4 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
ALMS1Q8TCU4 CCT4P2-201ENST00000233836 1548 ntBASIC0.99□□□□□ -2.25
ALMS1Q8TCU4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
ALMS1Q8TCU4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC0.99□□□□□ -2.25
ALMS1Q8TCU4 AC017099.1-201ENST00000448261 1028 ntBASIC0.99□□□□□ -2.25
ALMS1Q8TCU4 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC0.99□□□□□ -2.25
ALMS1Q8TCU4 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC0.99□□□□□ -2.25
ALMS1Q8TCU4 SNORA31.24-201ENST00000517232 57 ntBASIC0.99□□□□□ -2.25
ALMS1Q8TCU4 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC0.99□□□□□ -2.25
ALMS1Q8TCU4 AL078603.1-201ENST00000603824 313 ntBASIC0.99□□□□□ -2.25
ALMS1Q8TCU4 AC005332.10-201ENST00000612725 619 ntBASIC0.99□□□□□ -2.25
ALMS1Q8TCU4 AL359851.1-201ENST00000569460 4997 ntBASIC0.99□□□□□ -2.25
ALMS1Q8TCU4 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.99□□□□□ -2.25
ALMS1Q8TCU4 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC0.99□□□□□ -2.25
ALMS1Q8TCU4 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.99□□□□□ -2.25
ALMS1Q8TCU4 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
ALMS1Q8TCU4 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
ALMS1Q8TCU4 RMST_6.1-201ENST00000611980 203 ntBASIC0.99□□□□□ -2.25
ALMS1Q8TCU4 OR4G11P-202ENST00000642116 1414 ntBASIC0.99□□□□□ -2.25
ALMS1Q8TCU4 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC0.99□□□□□ -2.25
ALMS1Q8TCU4 ZNF209P-201ENST00000593450 2304 ntBASIC0.99□□□□□ -2.25
ALMS1Q8TCU4 ZNF519P1-201ENST00000449011 1626 ntBASIC0.99□□□□□ -2.25
ALMS1Q8TCU4 KATNBL1P3-201ENST00000443475 909 ntBASIC0.99□□□□□ -2.25
ALMS1Q8TCU4 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.99□□□□□ -2.25
ALMS1Q8TCU4 HMGB3P17-201ENST00000504195 649 ntBASIC0.99□□□□□ -2.25
ALMS1Q8TCU4 MTCO3P44-201ENST00000510977 541 ntBASIC0.99□□□□□ -2.25
ALMS1Q8TCU4 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC0.99□□□□□ -2.25
ALMS1Q8TCU4 AC016727.2-201ENST00000603988 621 ntBASIC0.99□□□□□ -2.25
ALMS1Q8TCU4 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC0.99□□□□□ -2.25
ALMS1Q8TCU4 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC0.99□□□□□ -2.25
ALMS1Q8TCU4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.98□□□□□ -2.25
ALMS1Q8TCU4 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
ALMS1Q8TCU4 MIR520E-201ENST00000384867 87 ntBASIC0.98□□□□□ -2.25
ALMS1Q8TCU4 RPS29P1-201ENST00000465274 159 ntBASIC0.98□□□□□ -2.25
ALMS1Q8TCU4 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC0.98□□□□□ -2.25
ALMS1Q8TCU4 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC0.98□□□□□ -2.25
ALMS1Q8TCU4 AC107214.2-201ENST00000608204 634 ntBASIC0.98□□□□□ -2.25
ALMS1Q8TCU4 MIR7973-1-201ENST00000614683 76 ntBASIC0.98□□□□□ -2.25
ALMS1Q8TCU4 AC098657.3-201ENST00000620434 263 ntBASIC0.98□□□□□ -2.25
ALMS1Q8TCU4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC0.98□□□□□ -2.25
ALMS1Q8TCU4 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC0.98□□□□□ -2.25
ALMS1Q8TCU4 RPS6P15-201ENST00000431996 751 ntBASIC0.98□□□□□ -2.25
ALMS1Q8TCU4 RNA5SP233-201ENST00000459153 113 ntBASIC0.98□□□□□ -2.25
ALMS1Q8TCU4 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC0.98□□□□□ -2.25
ALMS1Q8TCU4 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms