Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 VN1R10P-201ENST00000447106 875 ntBASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 AL353691.1-201ENST00000451332 387 ntBASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 AL109933.2-201ENST00000452651 260 ntBASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 RN7SL432P-201ENST00000484057 298 ntBASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 RPL36AP51-201ENST00000487216 318 ntBASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 AC026436.1-201ENST00000510537 270 ntBASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 RNU5F-8P-201ENST00000515941 111 ntBASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 RNA5SP148-201ENST00000516527 94 ntBASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 AC023632.1-201ENST00000518463 375 ntBASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 AP003467.2-201ENST00000520175 319 ntBASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 AP005902.1-201ENST00000521358 186 ntBASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 AP000889.2-201ENST00000532684 490 ntBASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 MIR4513-201ENST00000581077 86 ntBASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 HMGN2P15-201ENST00000585707 270 ntBASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 DUXAP11-201ENST00000603858 526 ntBASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 AC007621.1-201ENST00000604544 437 ntBASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 AC067747.1-201ENST00000608026 250 ntBASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 AC008498.1-201ENST00000613012 531 ntBASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 MIR6817-201ENST00000615588 66 ntBASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 AC007998.5-201ENST00000622938 237 ntBASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 AL160394.1-201ENST00000624765 724 ntBASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 U6.101-201ENST00000637707 76 ntBASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 ZNF658B-202ENST00000615961 3375 ntBASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 RPL21P132-201ENST00000331267 462 ntBASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 FTLP6-201ENST00000355274 422 ntBASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 RNU6-220P-201ENST00000390919 107 ntBASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 AL359511.1-201ENST00000402970 211 ntBASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 AL356131.1-201ENST00000405826 414 ntBASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 PTGES3P2-201ENST00000407942 482 ntBASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 NPM1P11-201ENST00000417106 855 ntBASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 CCDC58P2-201ENST00000417131 366 ntBASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 USP9YP27-201ENST00000418455 438 ntBASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 NUP35P1-201ENST00000422734 947 ntBASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 AC018630.2-202ENST00000422992 927 ntBASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 MTND2P5-201ENST00000432656 1006 ntBASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 AL096829.2-201ENST00000446582 742 ntBASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 EEF1B2P7-201ENST00000451177 676 ntBASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 MRPL42P4-201ENST00000453267 443 ntBASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 MTATP6P7-201ENST00000453315 681 ntBASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 MTND2P24-201ENST00000453434 806 ntBASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 AC023141.11-201ENST00000508864 202 ntBASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 AC022447.1-201ENST00000515358 464 ntBASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 OR4R2P-201ENST00000530815 597 ntBASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 AC027176.1-201ENST00000560204 514 ntBASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 AC004009.2-201ENST00000623016 728 ntBASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 AC004944.1-201ENST00000517807 3059 ntBASIC2.26□□□□□ -2.05
CLHC1Q8NHS4 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 OR5H15-201ENST00000383696 930 ntBASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 RNU6-468P-201ENST00000384003 109 ntBASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 Y_RNA.510-201ENST00000384511 114 ntBASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 RNA5SP184-201ENST00000411071 108 ntBASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 AC019178.2-201ENST00000423595 505 ntBASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 AC007742.1-201ENST00000425789 329 ntBASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 ELOCP26-201ENST00000436067 329 ntBASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 PIGFP3-201ENST00000441918 722 ntBASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 AP1S2P1-201ENST00000457344 379 ntBASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 AC105252.1-201ENST00000503089 286 ntBASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 AC010460.2-201ENST00000509054 677 ntBASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 AC021269.2-201ENST00000532318 330 ntBASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 AC024224.1-201ENST00000538284 609 ntBASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 AC125611.1-201ENST00000549563 229 ntBASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 AC078814.3-201ENST00000553036 491 ntBASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 AP001542.2-201ENST00000593141 364 ntBASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 AC098483.2-201ENST00000603158 454 ntBASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 AC025588.2-201ENST00000604851 466 ntBASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 AC009090.3-201ENST00000616553 565 ntBASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 OR4G2P-202ENST00000641004 1759 ntBASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CLHC1Q8NHS4 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
CLHC1Q8NHS4 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CLHC1Q8NHS4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.24□□□□□ -2.05
CLHC1Q8NHS4 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms