Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC71LQ8N9Z2 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 RPL9P7-201ENST00000330965 580 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 Y_RNA.126-201ENST00000363382 111 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 SNORA23-201ENST00000365128 182 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 SNORA36C-201ENST00000384289 132 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 RNU6-769P-201ENST00000384407 104 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 MIR514A1-201ENST00000385133 98 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 AL356057.2-201ENST00000403318 432 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 RN7SKP159-201ENST00000410657 292 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 RPL7L1P10-201ENST00000427790 463 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 AC005019.1-201ENST00000436455 431 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 UBE2V1P13-201ENST00000436983 439 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 FAM103A2P-201ENST00000444122 354 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 RPL21P41-201ENST00000459863 264 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 RPL30P6-201ENST00000475925 342 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 RPS27AP9-201ENST00000477681 438 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 AC103975.1-201ENST00000482506 483 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 AC005178.1-201ENST00000508392 440 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 MTND4LP31-201ENST00000514859 294 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 RNU6-928P-201ENST00000516876 104 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 RNU6-840P-201ENST00000517275 65 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 MTND2P38-201ENST00000522536 667 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 AC011611.1-201ENST00000552179 197 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 MTCO3P13-201ENST00000577757 781 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 UBE2L4-201ENST00000587688 464 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 PRELID3BP8-201ENST00000604148 295 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 AC013553.2-201ENST00000604244 589 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 AL161734.1-201ENST00000609720 557 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 AL020991.1-201ENST00000612314 373 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 AC107871.2-201ENST00000612894 502 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 AL121772.2-201ENST00000614331 297 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 AC138932.5-201ENST00000617759 563 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 AC244100.1-202ENST00000621554 382 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 AC010338.1-201ENST00000621823 717 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 AL158801.5-201ENST00000623123 465 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 AC091931.1-201ENST00000623488 728 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 AL034408.1-202ENST00000636088 415 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 AC092125.1-201ENST00000562568 1995 ntBASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
CCDC71LQ8N9Z2 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 AC009487.2-201ENST00000420969 6821 ntBASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 RNY3P9-201ENST00000384727 106 ntBASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 U8.14-201ENST00000390843 143 ntBASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 CCNG1P1-201ENST00000406783 885 ntBASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 UBE2FP1-201ENST00000416536 447 ntBASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 AL445584.1-201ENST00000431451 330 ntBASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 LARP1BP3-201ENST00000437229 869 ntBASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 SETP11-201ENST00000473027 690 ntBASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 AC135721.1-201ENST00000497954 479 ntBASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 AC116347.2-201ENST00000514912 523 ntBASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 AP000867.2-201ENST00000532468 320 ntBASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 AC034105.3-201ENST00000565294 442 ntBASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 AC135628.1-201ENST00000568867 534 ntBASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 AC008739.2-201ENST00000597006 317 ntBASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 WISP1-OT1-201ENST00000602893 642 ntBASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 BCRP9-201ENST00000605312 388 ntBASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 AC022079.1-201ENST00000621546 602 ntBASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 AC079597.1-201ENST00000624306 508 ntBASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 MIR622-201ENST00000638396 96 ntBASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 AC006927.3-201ENST00000638789 384 ntBASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC71LQ8N9Z2 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms