Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.82□□□□□ -1.8
VPS52Q8N1B4 AC103783.1-201ENST00000520506 373 ntBASIC3.82□□□□□ -1.8
VPS52Q8N1B4 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.82□□□□□ -1.8
VPS52Q8N1B4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.82□□□□□ -1.8
VPS52Q8N1B4 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS52Q8N1B4 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS52Q8N1B4 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS52Q8N1B4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS52Q8N1B4 RPL21P12-201ENST00000559810 515 ntBASIC3.82□□□□□ -1.8
VPS52Q8N1B4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS52Q8N1B4 AC025165.5-201ENST00000602802 578 ntBASIC3.82□□□□□ -1.8
VPS52Q8N1B4 AL158211.4-201ENST00000606988 584 ntBASIC3.82□□□□□ -1.8
VPS52Q8N1B4 MIR6130-201ENST00000619419 109 ntBASIC3.82□□□□□ -1.8
VPS52Q8N1B4 U4.6-201ENST00000621618 127 ntBASIC3.82□□□□□ -1.8
VPS52Q8N1B4 PLCE1P1-201ENST00000622094 305 ntBASIC3.82□□□□□ -1.8
VPS52Q8N1B4 AL159972.1-201ENST00000625150 448 ntBASIC3.82□□□□□ -1.8
VPS52Q8N1B4 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VPS52Q8N1B4 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS52Q8N1B4 AL672296.1-201ENST00000427780 2158 ntBASIC3.82□□□□□ -1.8
VPS52Q8N1B4 PWAR6-201ENST00000552334 4618 ntBASIC3.82□□□□□ -1.8
VPS52Q8N1B4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS52Q8N1B4 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
VPS52Q8N1B4 RNU5A-8P-201ENST00000364102 114 ntBASIC3.81□□□□□ -1.8
VPS52Q8N1B4 Y_RNA.516-201ENST00000384541 124 ntBASIC3.81□□□□□ -1.8
VPS52Q8N1B4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
VPS52Q8N1B4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.81□□□□□ -1.8
VPS52Q8N1B4 RNU2-8P-201ENST00000410727 190 ntBASIC3.81□□□□□ -1.8
VPS52Q8N1B4 CCDC58P2-201ENST00000417131 366 ntBASIC3.81□□□□□ -1.8
VPS52Q8N1B4 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS52Q8N1B4 AC005300.1-201ENST00000428401 373 ntBASIC3.81□□□□□ -1.8
VPS52Q8N1B4 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS52Q8N1B4 USP9YP28-201ENST00000435142 589 ntBASIC3.81□□□□□ -1.8
VPS52Q8N1B4 TIMM9P1-201ENST00000436122 256 ntBASIC3.81□□□□□ -1.8
VPS52Q8N1B4 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS52Q8N1B4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS52Q8N1B4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.81□□□□□ -1.8
VPS52Q8N1B4 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.81□□□□□ -1.8
VPS52Q8N1B4 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.81□□□□□ -1.8
VPS52Q8N1B4 AL359385.1-201ENST00000456509 365 ntBASIC3.81□□□□□ -1.8
VPS52Q8N1B4 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS52Q8N1B4 RPL9P33-201ENST00000484311 566 ntBASIC3.81□□□□□ -1.8
VPS52Q8N1B4 AC093278.1-201ENST00000494700 600 ntBASIC3.81□□□□□ -1.8
VPS52Q8N1B4 HMGB1P22-201ENST00000505315 124 ntBASIC3.81□□□□□ -1.8
VPS52Q8N1B4 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VPS52Q8N1B4 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS52Q8N1B4 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
VPS52Q8N1B4 MTND1P5-201ENST00000517906 940 ntBASIC3.81□□□□□ -1.8
VPS52Q8N1B4 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS52Q8N1B4 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS52Q8N1B4 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS52Q8N1B4 AC008489.1-201ENST00000524271 483 ntBASIC3.81□□□□□ -1.8
VPS52Q8N1B4 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS52Q8N1B4 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS52Q8N1B4 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.81□□□□□ -1.8
VPS52Q8N1B4 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS52Q8N1B4 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS52Q8N1B4 COX6CP3-201ENST00000580869 223 ntBASIC3.81□□□□□ -1.8
VPS52Q8N1B4 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS52Q8N1B4 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS52Q8N1B4 KLKP1-201ENST00000595979 403 ntBASIC3.81□□□□□ -1.8
VPS52Q8N1B4 SNRPGP15-201ENST00000600149 222 ntBASIC3.81□□□□□ -1.8
VPS52Q8N1B4 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS52Q8N1B4 AL022154.1-201ENST00000604698 785 ntBASIC3.81□□□□□ -1.8
VPS52Q8N1B4 uc_338.12-201ENST00000616344 181 ntBASIC3.81□□□□□ -1.8
VPS52Q8N1B4 AC112204.3-201ENST00000623822 332 ntBASIC3.81□□□□□ -1.8
VPS52Q8N1B4 AC110994.2-201ENST00000635481 492 ntBASIC3.81□□□□□ -1.8
VPS52Q8N1B4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VPS52Q8N1B4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS52Q8N1B4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS52Q8N1B4 MAPK10-362ENST00000641864 4484 ntBASIC3.8□□□□□ -1.8
VPS52Q8N1B4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS52Q8N1B4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS52Q8N1B4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.8□□□□□ -1.8
VPS52Q8N1B4 ZNF826P-207ENST00000622273 1910 ntBASIC3.8□□□□□ -1.8
VPS52Q8N1B4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.8□□□□□ -1.8
VPS52Q8N1B4 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS52Q8N1B4 RNU5E-1-201ENST00000362477 120 ntBASIC3.8□□□□□ -1.8
VPS52Q8N1B4 RN7SKP226-201ENST00000364912 300 ntBASIC3.8□□□□□ -1.8
VPS52Q8N1B4 MIR184-201ENST00000384962 84 ntBASIC3.8□□□□□ -1.8
VPS52Q8N1B4 RNU6-754P-201ENST00000391166 107 ntBASIC3.8□□□□□ -1.8
VPS52Q8N1B4 MRPL42P2-201ENST00000403169 426 ntBASIC3.8□□□□□ -1.8
VPS52Q8N1B4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.8□□□□□ -1.8
VPS52Q8N1B4 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS52Q8N1B4 PIGFP2-201ENST00000421400 651 ntBASIC3.8□□□□□ -1.8
VPS52Q8N1B4 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.8□□□□□ -1.8
VPS52Q8N1B4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS52Q8N1B4 MTND1P1-201ENST00000445453 368 ntBASIC3.8□□□□□ -1.8
VPS52Q8N1B4 RPS29P31-201ENST00000446147 164 ntBASIC3.8□□□□□ -1.8
VPS52Q8N1B4 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.8□□□□□ -1.8
VPS52Q8N1B4 SRRM1P2-201ENST00000464531 1192 ntBASIC3.8□□□□□ -1.8
VPS52Q8N1B4 MTCO2P29-201ENST00000465212 189 ntBASIC3.8□□□□□ -1.8
VPS52Q8N1B4 RPS29P2-201ENST00000479278 136 ntBASIC3.8□□□□□ -1.8
VPS52Q8N1B4 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS52Q8N1B4 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS52Q8N1B4 AC020893.1-201ENST00000502452 580 ntBASIC3.8□□□□□ -1.8
VPS52Q8N1B4 GMPSP1-201ENST00000514075 579 ntBASIC3.8□□□□□ -1.8
VPS52Q8N1B4 AP004371.1-201ENST00000525240 214 ntBASIC3.8□□□□□ -1.8
VPS52Q8N1B4 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS52Q8N1B4 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.8□□□□□ -1.8
VPS52Q8N1B4 AC087481.2-201ENST00000565492 330 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms