Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 LARP1BP3-201ENST00000437229 869 ntBASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 RPS24P13-201ENST00000442520 397 ntBASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 FAM103A2P-201ENST00000444122 354 ntBASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 SNORD121B-201ENST00000458838 81 ntBASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 VN1R104P-201ENST00000505115 1009 ntBASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 AC105914.1-201ENST00000511798 226 ntBASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 RNA5SP356-201ENST00000515972 94 ntBASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 AC087373.1-201ENST00000524920 491 ntBASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 MTCO3P24-201ENST00000572729 782 ntBASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 COX6CP3-201ENST00000580869 223 ntBASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 AC008088.1-201ENST00000580993 280 ntBASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 WISP1-OT1-201ENST00000602893 642 ntBASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 BCRP9-201ENST00000605312 388 ntBASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 AC008962.1-201ENST00000605729 304 ntBASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 AC091965.4-201ENST00000607691 587 ntBASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 AC005183.1-201ENST00000603687 1979 ntBASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 PABPC1P9-201ENST00000426076 1612 ntBASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 RNU6-1078P-201ENST00000364522 103 ntBASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 RNU5A-2P-201ENST00000384337 116 ntBASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 AL031577.2-201ENST00000404133 280 ntBASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 MTCO1P39-201ENST00000426148 480 ntBASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 UBE2V1P13-201ENST00000436983 439 ntBASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 RPL7P36-201ENST00000444633 681 ntBASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 AC118465.1-201ENST00000513820 1271 ntBASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 AC116347.2-201ENST00000514912 523 ntBASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 RNU6-711P-201ENST00000517255 106 ntBASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 MTCO1P47-201ENST00000523889 1271 ntBASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 MIR3915-201ENST00000578518 97 ntBASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 AC060771.1-201ENST00000582031 164 ntBASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 AP001429.1-201ENST00000602568 530 ntBASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 AL355810.1-201ENST00000614629 552 ntBASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 AC006927.3-201ENST00000638789 384 ntBASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 AC006378.2-201ENST00000623178 2476 ntBASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC60Q8IWA6 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 AC092125.1-201ENST00000562568 1995 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 RNU6-501P-201ENST00000364072 100 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 SNORD116-8-201ENST00000384365 95 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 U3.20-201ENST00000390909 217 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 MTCYBP36-201ENST00000404146 440 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 RPS3AP24-201ENST00000407896 734 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 AL359704.1-201ENST00000411586 781 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 NDUFB4P5-201ENST00000415445 361 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 SDCBPP3-201ENST00000419629 891 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 RPS27AP14-201ENST00000422868 454 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 AC024082.2-201ENST00000434771 238 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 RPS20P5-201ENST00000434808 360 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 AC004866.2-201ENST00000438285 481 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 UBE2D3P4-201ENST00000441973 436 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 RPL36AP33-201ENST00000450395 310 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 KATNBL1P6-201ENST00000453433 915 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 RPL21P41-201ENST00000459863 264 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 RN7SL75P-201ENST00000461926 281 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 MTND3P7-201ENST00000474435 343 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 AC004924.1-201ENST00000480160 781 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 RNU6-798P-201ENST00000516912 103 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 IGHV3-76-201ENST00000522465 295 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms