Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 MRPS36P1-201ENST00000421291 307 ntBASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 OFD1P3Y-201ENST00000453312 783 ntBASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 SUMO2P2-201ENST00000456482 255 ntBASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 AC108734.3-201ENST00000481241 1165 ntBASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 MRPL42P6-201ENST00000486397 371 ntBASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 COX7A2P2-201ENST00000505291 250 ntBASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 XKRY-201ENST00000510392 1100 ntBASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 AC026436.1-201ENST00000510537 270 ntBASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 RNU6-1225P-201ENST00000516336 65 ntBASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 RN7SKP31-201ENST00000516354 278 ntBASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 RNA5SP24-201ENST00000516478 95 ntBASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 RNA5SP402-201ENST00000517148 110 ntBASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 AC091163.3-201ENST00000518269 1144 ntBASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 AC087241.2-201ENST00000535801 324 ntBASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 YWHAZP1-201ENST00000556286 722 ntBASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 TRAV28-201ENST00000557548 323 ntBASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 AC105137.2-201ENST00000569073 466 ntBASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 MIR3117-201ENST00000584034 78 ntBASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 AC105224.1-201ENST00000587055 421 ntBASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 VN1R83P-201ENST00000595685 445 ntBASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 AC103810.6-201ENST00000606708 136 ntBASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 TUG1_1.1-201ENST00000610654 145 ntBASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 AC024257.5-201ENST00000612739 531 ntBASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 AC023158.2-201ENST00000614876 543 ntBASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 AL158163.2-201ENST00000619110 700 ntBASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 CR848007.1-201ENST00000442354 1699 ntBASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 SDAD1P2-201ENST00000441308 2028 ntBASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 ZNF271P-202ENST00000465539 1970 ntBASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 CDR1-202ENST00000625883 1485 ntBASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 Y_RNA.408-201ENST00000383987 102 ntBASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 MIR135A2-201ENST00000384854 100 ntBASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 MIR524-201ENST00000385242 87 ntBASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 AC019178.2-201ENST00000423595 505 ntBASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 AL592447.1-201ENST00000447592 540 ntBASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 AC005297.2-201ENST00000450430 606 ntBASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 AC026410.2-201ENST00000460281 156 ntBASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 RPL31P50-201ENST00000471002 296 ntBASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 AC023424.2-201ENST00000493479 777 ntBASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 AC096571.1-202ENST00000506634 735 ntBASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 AC234781.5-201ENST00000508429 271 ntBASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 AC118465.1-201ENST00000513820 1271 ntBASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 CASP1P1-201ENST00000526345 212 ntBASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 COX6CP5-201ENST00000527162 228 ntBASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 AC021269.2-201ENST00000532318 330 ntBASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 MTND3P13-201ENST00000574391 343 ntBASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 VN1R78P-201ENST00000597393 564 ntBASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 AF129408.1-201ENST00000608767 431 ntBASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 AC084824.4-201ENST00000620106 731 ntBASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 OR1S1-201ENST00000624470 978 ntBASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 AC099654.8-201ENST00000637757 681 ntBASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 MIR1322-201ENST00000638013 71 ntBASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 AL022578.1-201ENST00000439330 1433 ntBASIC2.42□□□□□ -2.02
CDKL3Q8IVW4 RNU1-52P-201ENST00000384190 164 ntBASIC2.41□□□□□ -2.02
CDKL3Q8IVW4 RNU6-1176P-201ENST00000390955 107 ntBASIC2.41□□□□□ -2.02
CDKL3Q8IVW4 RNU2-47P-201ENST00000410649 186 ntBASIC2.41□□□□□ -2.02
CDKL3Q8IVW4 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.41□□□□□ -2.02
CDKL3Q8IVW4 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.41□□□□□ -2.02
CDKL3Q8IVW4 MTND2P5-201ENST00000432656 1006 ntBASIC2.41□□□□□ -2.02
CDKL3Q8IVW4 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.41□□□□□ -2.02
CDKL3Q8IVW4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.41□□□□□ -2.02
CDKL3Q8IVW4 AC233279.1-201ENST00000455300 423 ntBASIC2.41□□□□□ -2.02
CDKL3Q8IVW4 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.41□□□□□ -2.02
CDKL3Q8IVW4 snoU13.28-201ENST00000459235 104 ntBASIC2.41□□□□□ -2.02
CDKL3Q8IVW4 AL135752.1-201ENST00000479477 471 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms