Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 ANP32BP2-201ENST00000454525 545 ntBASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 AP000852.1-201ENST00000472460 573 ntBASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 AC046134.1-201ENST00000514454 666 ntBASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 CBX3P5-201ENST00000552017 521 ntBASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 FGF7P1-201ENST00000582820 288 ntBASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 KC877982.1-201ENST00000602313 470 ntBASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 NRBF2P5-201ENST00000603087 788 ntBASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 AC104260.1-201ENST00000616660 539 ntBASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 MTND5P1-201ENST00000445440 1375 ntBASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 AC007390.2-201ENST00000606229 3803 ntBASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 RNY3P3-201ENST00000363816 102 ntBASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 RNVU1-3-201ENST00000364313 161 ntBASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 RNU6-456P-201ENST00000384493 107 ntBASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 BX323014.1-201ENST00000412876 237 ntBASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 AC007283.2-201ENST00000424739 197 ntBASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 AC137499.1-201ENST00000427602 88 ntBASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 MTND3P23-201ENST00000431980 347 ntBASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 TIMM9P1-201ENST00000436122 256 ntBASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 HMGB3P12-201ENST00000438745 556 ntBASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 USP9YP8-201ENST00000441913 500 ntBASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 MTND1P9-201ENST00000453775 944 ntBASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 RPS20P24-201ENST00000457473 361 ntBASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 RNU6-507P-201ENST00000516045 100 ntBASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 RNU6-1220P-201ENST00000517126 108 ntBASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 NCAPGP2-201ENST00000557911 754 ntBASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 AC025449.1-201ENST00000603896 529 ntBASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 AL035413.2-201ENST00000604801 525 ntBASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 AL136363.1-201ENST00000605349 337 ntBASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 AC009994.1-201ENST00000606889 253 ntBASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 AC002550.2-201ENST00000621246 394 ntBASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 AC009033.1-201ENST00000624279 431 ntBASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 AC091925.2-201ENST00000625059 256 ntBASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 AL159972.1-201ENST00000625150 448 ntBASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 MIR3662-201ENST00000637030 95 ntBASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 AL138713.1-201ENST00000624026 2130 ntBASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 NMD3P1-201ENST00000439704 1488 ntBASIC4.37□□□□□ -1.71
UBE3BQ7Z3V4 PABPC1P7-201ENST00000413177 1513 ntBASIC4.36□□□□□ -1.71
UBE3BQ7Z3V4 MAPK10-373ENST00000641983 6772 ntBASIC4.36□□□□□ -1.71
UBE3BQ7Z3V4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
UBE3BQ7Z3V4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.36□□□□□ -1.71
UBE3BQ7Z3V4 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
UBE3BQ7Z3V4 RNY1P12-201ENST00000364251 105 ntBASIC4.36□□□□□ -1.71
UBE3BQ7Z3V4 RNU6-283P-201ENST00000364788 107 ntBASIC4.36□□□□□ -1.71
UBE3BQ7Z3V4 U3.15-201ENST00000365398 212 ntBASIC4.36□□□□□ -1.71
UBE3BQ7Z3V4 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
UBE3BQ7Z3V4 MIR19A-201ENST00000384878 82 ntBASIC4.36□□□□□ -1.71
UBE3BQ7Z3V4 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.36□□□□□ -1.71
UBE3BQ7Z3V4 RPL21P111-201ENST00000418453 477 ntBASIC4.36□□□□□ -1.71
UBE3BQ7Z3V4 ELOCP4-201ENST00000420090 333 ntBASIC4.36□□□□□ -1.71
UBE3BQ7Z3V4 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.36□□□□□ -1.71
UBE3BQ7Z3V4 AL158156.1-201ENST00000422509 473 ntBASIC4.36□□□□□ -1.71
UBE3BQ7Z3V4 MTND4P28-201ENST00000426217 387 ntBASIC4.36□□□□□ -1.71
UBE3BQ7Z3V4 AC017083.1-201ENST00000428093 483 ntBASIC4.36□□□□□ -1.71
UBE3BQ7Z3V4 AC005300.1-201ENST00000428401 373 ntBASIC4.36□□□□□ -1.71
UBE3BQ7Z3V4 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.36□□□□□ -1.71
UBE3BQ7Z3V4 GPR143P-201ENST00000434155 205 ntBASIC4.36□□□□□ -1.71
UBE3BQ7Z3V4 FTH1P1-201ENST00000437933 532 ntBASIC4.36□□□□□ -1.71
UBE3BQ7Z3V4 AC093156.1-201ENST00000440382 670 ntBASIC4.36□□□□□ -1.71
UBE3BQ7Z3V4 RN7SL93P-201ENST00000463035 293 ntBASIC4.36□□□□□ -1.71
UBE3BQ7Z3V4 RPL37P6-202ENST00000464216 403 ntBASIC4.36□□□□□ -1.71
UBE3BQ7Z3V4 RN7SL594P-201ENST00000470590 287 ntBASIC4.36□□□□□ -1.71
UBE3BQ7Z3V4 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms