Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 AL672296.1-201ENST00000427780 2158 ntBASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 Y_RNA.159-201ENST00000363674 87 ntBASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 RNU6-74P-201ENST00000384235 107 ntBASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 MIR183-201ENST00000384958 110 ntBASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 MIR513A2-201ENST00000385249 127 ntBASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 RN7SKP140-201ENST00000411196 284 ntBASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 UBE2V1P10-201ENST00000414685 269 ntBASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 AL035423.1-201ENST00000420331 213 ntBASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 DPPA2P1-201ENST00000428060 556 ntBASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 RPS20P5-201ENST00000434808 360 ntBASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 HSPD1P21-201ENST00000436541 245 ntBASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 AC083863.1-201ENST00000438811 231 ntBASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 HMGN2P16-201ENST00000456802 261 ntBASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 AC022364.2-201ENST00000457963 554 ntBASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 AC126182.1-201ENST00000478134 357 ntBASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 AC026427.2-201ENST00000506228 536 ntBASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 AC017037.1-201ENST00000508460 471 ntBASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 SCARNA15.2-201ENST00000516409 127 ntBASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 NRON-201ENST00000517270 370 ntBASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 AP003034.1-201ENST00000534621 422 ntBASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 AC136619.2-201ENST00000563361 631 ntBASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 MIR3200-201ENST00000580767 85 ntBASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 AC106900.2-201ENST00000604994 317 ntBASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 AF250324.2-201ENST00000608299 610 ntBASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 SEPT14P19-203ENST00000633205 211 ntBASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 MTND5P1-201ENST00000445440 1375 ntBASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 AC066616.2-201ENST00000559334 1481 ntBASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC149Q6ZUS6 OR4G2P-202ENST00000641004 1759 ntBASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 PRO1804-201ENST00000623780 2050 ntBASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 NDUFS5P1-201ENST00000405668 289 ntBASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 MTATP6P18-201ENST00000417994 673 ntBASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 ZNF90P2-204ENST00000419323 1075 ntBASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 AL451054.2-201ENST00000420896 202 ntBASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 ISCA1P1-201ENST00000426679 387 ntBASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 RPL7P28-201ENST00000437739 740 ntBASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 MTATP6P30-201ENST00000443540 664 ntBASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 AC093899.1-201ENST00000457984 376 ntBASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 AL133162.1-201ENST00000463228 453 ntBASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 AC104619.4-201ENST00000510773 249 ntBASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 AC074250.1-201ENST00000511117 192 ntBASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 RNU6-314P-201ENST00000516574 104 ntBASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 RN7SKP258-201ENST00000517151 304 ntBASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 AL359212.1-201ENST00000556608 614 ntBASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 AP005205.1-201ENST00000563503 508 ntBASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 CYP4A43P-201ENST00000568156 121 ntBASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 AC017083.3-201ENST00000609955 700 ntBASIC4.09□□□□□ -1.75
CCDC149Q6ZUS6 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms