Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 AL079305.1-201ENST00000623159 3008 ntBASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 RNU4-91P-201ENST00000364778 135 ntBASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 SNORA26.8-201ENST00000391306 124 ntBASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 Y_RNA.598-201ENST00000410480 95 ntBASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 RN7SKP140-201ENST00000411196 284 ntBASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 AC093156.1-201ENST00000440382 670 ntBASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 RPS20P22-201ENST00000473700 357 ntBASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 SNORA70.19-201ENST00000516717 90 ntBASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 RNU6-64P-201ENST00000517119 105 ntBASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 AC123904.2-201ENST00000548059 300 ntBASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 AC004024.1-201ENST00000549244 247 ntBASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 HMGB1P14-201ENST00000557424 591 ntBASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 MIR5195-201ENST00000583555 115 ntBASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 AC002545.1-201ENST00000592511 181 ntBASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 AC012065.4-201ENST00000602445 679 ntBASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 AC112191.3-201ENST00000604371 277 ntBASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 AL161756.2-201ENST00000604597 246 ntBASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 AL442067.2-201ENST00000614033 363 ntBASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 uc_338.12-201ENST00000616344 181 ntBASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 AC108479.2-201ENST00000617314 601 ntBASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 AC007496.3-201ENST00000624987 3443 ntBASIC3.54□□□□□ -1.84
SNX30Q5VWJ9 RNU1-39P-201ENST00000383897 165 ntBASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 MRPL42P2-201ENST00000403169 426 ntBASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 SPA17P1-201ENST00000416656 452 ntBASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 NPM1P11-201ENST00000417106 855 ntBASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 AL451054.2-201ENST00000420896 202 ntBASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 AL356583.2-201ENST00000426536 280 ntBASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 AC092573.2-201ENST00000434546 243 ntBASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 COX6CP2-201ENST00000444980 225 ntBASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 CBWD4P-201ENST00000445695 655 ntBASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 RNU6-420P-201ENST00000458780 107 ntBASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 HMGN2P13-201ENST00000476476 274 ntBASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 SNORA31.1-201ENST00000515993 133 ntBASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 SNORA31.5-201ENST00000516190 133 ntBASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 Y_RNA.688-201ENST00000516565 95 ntBASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 NRON-201ENST00000517270 370 ntBASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 RPL12P22-201ENST00000519073 490 ntBASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 AC007115.1-201ENST00000546853 234 ntBASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 AC005951.2-201ENST00000576282 495 ntBASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 AC013553.2-201ENST00000604244 589 ntBASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 AC068276.1-201ENST00000605793 379 ntBASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 RNU6-87P-201ENST00000607561 108 ntBASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 BX664608.1-201ENST00000610519 487 ntBASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 AC104010.1-201ENST00000616889 150 ntBASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 AC092140.2-201ENST00000618027 521 ntBASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 FRG1KP-201ENST00000623592 341 ntBASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SNX30Q5VWJ9 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.85
SNX30Q5VWJ9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SNX30Q5VWJ9 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SNX30Q5VWJ9 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
SNX30Q5VWJ9 U3.19-201ENST00000390893 196 ntBASIC3.52□□□□□ -1.85
SNX30Q5VWJ9 AL021407.1-201ENST00000404531 386 ntBASIC3.52□□□□□ -1.85
SNX30Q5VWJ9 BX323014.1-201ENST00000412876 237 ntBASIC3.52□□□□□ -1.85
SNX30Q5VWJ9 USP9YP13-201ENST00000417797 480 ntBASIC3.52□□□□□ -1.85
SNX30Q5VWJ9 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.52□□□□□ -1.85
SNX30Q5VWJ9 CYCSP46-201ENST00000423569 204 ntBASIC3.52□□□□□ -1.85
SNX30Q5VWJ9 AC244035.1-201ENST00000430042 390 ntBASIC3.52□□□□□ -1.85
SNX30Q5VWJ9 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.52□□□□□ -1.85
SNX30Q5VWJ9 AC098826.1-201ENST00000433943 471 ntBASIC3.52□□□□□ -1.85
SNX30Q5VWJ9 AC129850.1-201ENST00000436203 508 ntBASIC3.52□□□□□ -1.85
SNX30Q5VWJ9 RPS3AP12-201ENST00000443616 753 ntBASIC3.52□□□□□ -1.85
SNX30Q5VWJ9 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.52□□□□□ -1.85
SNX30Q5VWJ9 MTND1P12-201ENST00000455231 147 ntBASIC3.52□□□□□ -1.85
SNX30Q5VWJ9 AC010631.1-201ENST00000474150 156 ntBASIC3.52□□□□□ -1.85
SNX30Q5VWJ9 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.52□□□□□ -1.85
SNX30Q5VWJ9 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.52□□□□□ -1.85
SNX30Q5VWJ9 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.52□□□□□ -1.85
SNX30Q5VWJ9 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.52□□□□□ -1.85
SNX30Q5VWJ9 RNU6-1282P-201ENST00000516735 96 ntBASIC3.52□□□□□ -1.85
SNX30Q5VWJ9 RNU6-711P-201ENST00000517255 106 ntBASIC3.52□□□□□ -1.85
SNX30Q5VWJ9 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.52□□□□□ -1.85
SNX30Q5VWJ9 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.52□□□□□ -1.85
SNX30Q5VWJ9 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.52□□□□□ -1.85
SNX30Q5VWJ9 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms