Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC38Q502W7 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.83□□□□□ -1.8
CCDC38Q502W7 CASP1P1-201ENST00000526345 212 ntBASIC3.83□□□□□ -1.8
CCDC38Q502W7 ATP5F1P5-201ENST00000526403 760 ntBASIC3.83□□□□□ -1.8
CCDC38Q502W7 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC38Q502W7 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC38Q502W7 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC38Q502W7 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC38Q502W7 KLKP1-201ENST00000595979 403 ntBASIC3.83□□□□□ -1.8
CCDC38Q502W7 AC073648.5-201ENST00000603502 305 ntBASIC3.83□□□□□ -1.8
CCDC38Q502W7 NDUFA8P1-201ENST00000605525 367 ntBASIC3.83□□□□□ -1.8
CCDC38Q502W7 MIR98-201ENST00000606724 119 ntBASIC3.83□□□□□ -1.8
CCDC38Q502W7 AL139286.2-201ENST00000606838 396 ntBASIC3.83□□□□□ -1.8
CCDC38Q502W7 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC38Q502W7 MIR8058-201ENST00000615737 89 ntBASIC3.83□□□□□ -1.8
CCDC38Q502W7 FP236240.3-201ENST00000623061 327 ntBASIC3.83□□□□□ -1.8
CCDC38Q502W7 AC139792.2-201ENST00000624218 587 ntBASIC3.83□□□□□ -1.8
CCDC38Q502W7 AL137003.2-201ENST00000606924 2538 ntBASIC3.83□□□□□ -1.8
CCDC38Q502W7 AC093908.1-201ENST00000623125 8092 ntBASIC3.83□□□□□ -1.8
CCDC38Q502W7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC38Q502W7 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CCDC38Q502W7 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC38Q502W7 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC38Q502W7 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC38Q502W7 RNU6-960P-201ENST00000364056 120 ntBASIC3.82□□□□□ -1.8
CCDC38Q502W7 RNU6-169P-201ENST00000365336 107 ntBASIC3.82□□□□□ -1.8
CCDC38Q502W7 RNU6-741P-201ENST00000383889 107 ntBASIC3.82□□□□□ -1.8
CCDC38Q502W7 RPS4XP3-201ENST00000398541 413 ntBASIC3.82□□□□□ -1.8
CCDC38Q502W7 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC38Q502W7 Z85995.1-201ENST00000415547 335 ntBASIC3.82□□□□□ -1.8
CCDC38Q502W7 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC38Q502W7 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC38Q502W7 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC38Q502W7 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC38Q502W7 AC092573.2-201ENST00000434546 243 ntBASIC3.82□□□□□ -1.8
CCDC38Q502W7 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC38Q502W7 NDUFB1P1-201ENST00000435191 180 ntBASIC3.82□□□□□ -1.8
CCDC38Q502W7 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC38Q502W7 RPS27P29-201ENST00000463110 252 ntBASIC3.82□□□□□ -1.8
CCDC38Q502W7 AC004924.1-201ENST00000480160 781 ntBASIC3.82□□□□□ -1.8
CCDC38Q502W7 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC38Q502W7 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC38Q502W7 SCARNA14-201ENST00000516903 136 ntBASIC3.82□□□□□ -1.8
CCDC38Q502W7 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC38Q502W7 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC38Q502W7 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC38Q502W7 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC38Q502W7 TRAV37-201ENST00000553906 342 ntBASIC3.82□□□□□ -1.8
CCDC38Q502W7 RPL21P12-201ENST00000559810 515 ntBASIC3.82□□□□□ -1.8
CCDC38Q502W7 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.82□□□□□ -1.8
CCDC38Q502W7 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC38Q502W7 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC38Q502W7 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC38Q502W7 MTND1P15-201ENST00000579262 949 ntBASIC3.82□□□□□ -1.8
CCDC38Q502W7 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC38Q502W7 AC091805.2-201ENST00000603848 235 ntBASIC3.82□□□□□ -1.8
CCDC38Q502W7 AL109618.2-201ENST00000605527 211 ntBASIC3.82□□□□□ -1.8
CCDC38Q502W7 AC008962.1-201ENST00000605729 304 ntBASIC3.82□□□□□ -1.8
CCDC38Q502W7 SNORA62.6-201ENST00000606322 83 ntBASIC3.82□□□□□ -1.8
CCDC38Q502W7 AP002360.4-201ENST00000606980 481 ntBASIC3.82□□□□□ -1.8
CCDC38Q502W7 Z99129.1-201ENST00000612510 255 ntBASIC3.82□□□□□ -1.8
CCDC38Q502W7 AC068831.7-201ENST00000616954 363 ntBASIC3.82□□□□□ -1.8
CCDC38Q502W7 MIR6076-201ENST00000617521 113 ntBASIC3.82□□□□□ -1.8
CCDC38Q502W7 AC099842.1-201ENST00000619919 596 ntBASIC3.82□□□□□ -1.8
CCDC38Q502W7 AC027309.3-201ENST00000623419 351 ntBASIC3.82□□□□□ -1.8
CCDC38Q502W7 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC38Q502W7 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC38Q502W7 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC38Q502W7 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC38Q502W7 AC007785.2-201ENST00000598627 1916 ntBASIC3.82□□□□□ -1.8
CCDC38Q502W7 TPTE2P4-201ENST00000258589 1605 ntBASIC3.81□□□□□ -1.8
CCDC38Q502W7 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
CCDC38Q502W7 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
CCDC38Q502W7 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC38Q502W7 OR5J1P-201ENST00000313544 939 ntBASIC3.81□□□□□ -1.8
CCDC38Q502W7 RNU6-701P-201ENST00000384059 107 ntBASIC3.81□□□□□ -1.8
CCDC38Q502W7 Y_RNA.582-201ENST00000391023 95 ntBASIC3.81□□□□□ -1.8
CCDC38Q502W7 SOD2P1-201ENST00000396543 562 ntBASIC3.81□□□□□ -1.8
CCDC38Q502W7 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC38Q502W7 RPL7P2-201ENST00000427639 268 ntBASIC3.81□□□□□ -1.8
CCDC38Q502W7 DLGAP5P1-201ENST00000430307 464 ntBASIC3.81□□□□□ -1.8
CCDC38Q502W7 USP9YP14-201ENST00000430663 563 ntBASIC3.81□□□□□ -1.8
CCDC38Q502W7 HMGB3P12-201ENST00000438745 556 ntBASIC3.81□□□□□ -1.8
CCDC38Q502W7 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC38Q502W7 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC38Q502W7 MRPS31P2-201ENST00000451581 518 ntBASIC3.81□□□□□ -1.8
CCDC38Q502W7 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.81□□□□□ -1.8
CCDC38Q502W7 AC013267.1-201ENST00000458227 267 ntBASIC3.81□□□□□ -1.8
CCDC38Q502W7 AC023598.1-201ENST00000472521 361 ntBASIC3.81□□□□□ -1.8
CCDC38Q502W7 RN7SL323P-201ENST00000494712 295 ntBASIC3.81□□□□□ -1.8
CCDC38Q502W7 AC091435.1-201ENST00000505442 584 ntBASIC3.81□□□□□ -1.8
CCDC38Q502W7 AC010460.1-201ENST00000507087 466 ntBASIC3.81□□□□□ -1.8
CCDC38Q502W7 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CCDC38Q502W7 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC38Q502W7 MTND4LP31-201ENST00000514859 294 ntBASIC3.81□□□□□ -1.8
CCDC38Q502W7 RNA5SP291-201ENST00000517222 105 ntBASIC3.81□□□□□ -1.8
CCDC38Q502W7 NDUFB9P3-201ENST00000521269 501 ntBASIC3.81□□□□□ -1.8
CCDC38Q502W7 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC38Q502W7 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC38Q502W7 AP006587.4-201ENST00000526053 529 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms