Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 AC103710.2-202ENST00000641454 2853 ntBASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 Y_RNA.295-201ENST00000364918 102 ntBASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 SNORD115-7-201ENST00000365306 82 ntBASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 MIR670-201ENST00000390142 98 ntBASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 AL109913.1-201ENST00000421173 514 ntBASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 RBMX2P4-201ENST00000441256 376 ntBASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 CBWD4P-201ENST00000445695 655 ntBASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 PRDX3P3-201ENST00000447765 522 ntBASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 FAM92A1P2-202ENST00000504766 877 ntBASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 PRDX4P1-201ENST00000507189 574 ntBASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 RNU1-61P-201ENST00000516107 151 ntBASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 RNU6-1256P-201ENST00000516539 103 ntBASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 RNU6-835P-201ENST00000516974 104 ntBASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 HSPE1P5-201ENST00000561489 272 ntBASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 AC008752.3-201ENST00000588113 712 ntBASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 DPPA3P3-201ENST00000603842 430 ntBASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 AC007619.2-201ENST00000605743 379 ntBASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 MTND5P42-201ENST00000637720 498 ntBASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 AC004520.1-201ENST00000608362 1413 ntBASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC144BQ3MJ40 AC004972.1-201ENST00000623934 2209 ntBASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 AC007685.1-201ENST00000329806 452 ntBASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 RNU6-534P-201ENST00000364877 106 ntBASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 RNU6-1029P-201ENST00000384109 107 ntBASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 RNU6-908P-201ENST00000410160 94 ntBASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 AL161631.1-201ENST00000417933 486 ntBASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 AL451062.2-201ENST00000427515 271 ntBASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 AF228730.2-201ENST00000438784 848 ntBASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 MTND4P25-201ENST00000441039 533 ntBASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 RPS29P15-201ENST00000458329 171 ntBASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 AC146944.2-203ENST00000502493 354 ntBASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 AC139495.1-202ENST00000513164 354 ntBASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 AC234778.2-201ENST00000566241 354 ntBASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 AC008945.2-201ENST00000606056 604 ntBASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 AC107294.1-201ENST00000609524 467 ntBASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 DISC2.1-201ENST00000612827 205 ntBASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 AC090132.2-201ENST00000615881 347 ntBASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 MIR4727-201ENST00000622232 55 ntBASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 AC011155.2-201ENST00000623202 216 ntBASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC144BQ3MJ40 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 RNU6-1287P-201ENST00000362914 107 ntBASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 RNU6-14P-201ENST00000384630 106 ntBASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 RNU6-1060P-201ENST00000384664 107 ntBASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 MIR3074-201ENST00000384885 81 ntBASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 AC068533.1-201ENST00000418542 415 ntBASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 AC245054.1-201ENST00000420944 258 ntBASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 AC009237.8-201ENST00000445492 379 ntBASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 DPPA3P1-201ENST00000448050 469 ntBASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 HMGN2P16-201ENST00000456802 261 ntBASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 RNA5SP246-201ENST00000458909 119 ntBASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 RPL7L1P8-201ENST00000469911 741 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms